EuRBPDB

Description

Ensembl ID: MGP_NZOHlLtJ_G0030246 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpdl
Alias: AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|HnrpdlGN|JKTBP|hnRNP DL|hnRNP-DL
Full Name: heterogeneous nuclear ribonucleoprotein D-like
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 6081 bases
Position: chr5:100417120-100423200
Accession: 1355299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0073484	RRM_1	PF00076.22	2.4e-33	1	2
MGP_NZOHlLtJ_P0073484	RRM_1	PF00076.22	2.4e-33	2	2
MGP_NZOHlLtJ_P0073483	RRM_1	PF00076.22	5.3e-33	1	2
MGP_NZOHlLtJ_P0073483	RRM_1	PF00076.22	5.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0073482	-	1842	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0073483	-	2752	-	MGP_NZOHlLtJ_P0073483	420 (aa)	-	-
MGP_NZOHlLtJ_T0073484	-	2374	-	MGP_NZOHlLtJ_P0073484	322 (aa)	-	-
MGP_NZOHlLtJ_T0073485	-	2149	-	MGP_NZOHlLtJ_P0073485	420 (aa)	-	-
MGP_NZOHlLtJ_T0073486	-	884	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0073487	-	1477	-	MGP_NZOHlLtJ_P0073487	100 (aa)	-	-
MGP_NZOHlLtJ_T0073488	-	846	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0030246	Hnrnpdl	78	41.634	MGP_NZOHlLtJ_G0019357	Msi2	100	54.867
MGP_NZOHlLtJ_G0030246	Hnrnpdl	51	34.706	MGP_NZOHlLtJ_G0021054	Hnrnpa0	56	34.706
MGP_NZOHlLtJ_G0030246	Hnrnpdl	89	57.292	MGP_NZOHlLtJ_G0018702	Hnrnpab	82	58.419
MGP_NZOHlLtJ_G0030246	Hnrnpdl	55	38.824	MGP_NZOHlLtJ_G0026332	Hnrnpa3	79	33.224
MGP_NZOHlLtJ_G0030246	Hnrnpdl	64	30.000	MGP_NZOHlLtJ_G0029591	Tardbp	77	31.447
MGP_NZOHlLtJ_G0030246	Hnrnpdl	58	38.542	MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	58	38.824
MGP_NZOHlLtJ_G0030246	Hnrnpdl	69	36.036	MGP_NZOHlLtJ_G0017927	Dazap1	99	39.881
MGP_NZOHlLtJ_G0030246	Hnrnpdl	54	36.709	MGP_NZOHlLtJ_G0017921	Cirbp	73	36.709
MGP_NZOHlLtJ_G0030246	Hnrnpdl	89	65.278	MGP_NZOHlLtJ_G0030244	Hnrnpd	100	80.000
MGP_NZOHlLtJ_G0030246	Hnrnpdl	75	39.676	MGP_NZOHlLtJ_G0030440	Msi1	58	48.052