EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0030308 (Gene tree)
Gene ID: -
Gene Symbol: Gfi1
Alias: AW495828|Gfi-1|Pal-1|Pal1
Full Name: growth factor independent 1
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 9406 bases
Position: chr5:108523059-108532464
Accession: 103170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0073769	zf-C2H2	PF00096.26	5e-28	1	6
MGP_NZOHlLtJ_P0073769	zf-C2H2	PF00096.26	5e-28	2	6
MGP_NZOHlLtJ_P0073769	zf-C2H2	PF00096.26	5e-28	3	6
MGP_NZOHlLtJ_P0073769	zf-C2H2	PF00096.26	5e-28	4	6
MGP_NZOHlLtJ_P0073769	zf-C2H2	PF00096.26	5e-28	5	6
MGP_NZOHlLtJ_P0073769	zf-C2H2	PF00096.26	5e-28	6	6
MGP_NZOHlLtJ_P0073770	zf-C2H2	PF00096.26	5e-28	1	6
MGP_NZOHlLtJ_P0073770	zf-C2H2	PF00096.26	5e-28	2	6
MGP_NZOHlLtJ_P0073770	zf-C2H2	PF00096.26	5e-28	3	6
MGP_NZOHlLtJ_P0073770	zf-C2H2	PF00096.26	5e-28	4	6
MGP_NZOHlLtJ_P0073770	zf-C2H2	PF00096.26	5e-28	5	6
MGP_NZOHlLtJ_P0073770	zf-C2H2	PF00096.26	5e-28	6	6
MGP_NZOHlLtJ_P0073771	zf-C2H2	PF00096.26	1.5e-27	1	6
MGP_NZOHlLtJ_P0073771	zf-C2H2	PF00096.26	1.5e-27	2	6
MGP_NZOHlLtJ_P0073771	zf-C2H2	PF00096.26	1.5e-27	3	6
MGP_NZOHlLtJ_P0073771	zf-C2H2	PF00096.26	1.5e-27	4	6
MGP_NZOHlLtJ_P0073771	zf-C2H2	PF00096.26	1.5e-27	5	6
MGP_NZOHlLtJ_P0073771	zf-C2H2	PF00096.26	1.5e-27	6	6
MGP_NZOHlLtJ_P0073772	zf-C2H2	PF00096.26	9.5e-25	1	4
MGP_NZOHlLtJ_P0073772	zf-C2H2	PF00096.26	9.5e-25	2	4
MGP_NZOHlLtJ_P0073772	zf-C2H2	PF00096.26	9.5e-25	3	4
MGP_NZOHlLtJ_P0073772	zf-C2H2	PF00096.26	9.5e-25	4	4
MGP_NZOHlLtJ_P0073772	zf-met	PF12874.7	2.2e-08	1	1
MGP_NZOHlLtJ_P0073769	zf-met	PF12874.7	2.5e-07	1	1
MGP_NZOHlLtJ_P0073770	zf-met	PF12874.7	2.5e-07	1	1
MGP_NZOHlLtJ_P0073771	zf-met	PF12874.7	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0073769	-	2648	XM_006534791	MGP_NZOHlLtJ_P0073769	423 (aa)	XP_006534854	A0A0R4J292
MGP_NZOHlLtJ_T0073772	-	1482	-	MGP_NZOHlLtJ_P0073772	135 (aa)	-	-
MGP_NZOHlLtJ_T0073770	-	2860	-	MGP_NZOHlLtJ_P0073770	423 (aa)	-	-
MGP_NZOHlLtJ_T0073771	-	2639	-	MGP_NZOHlLtJ_P0073771	489 (aa)	-	-
MGP_NZOHlLtJ_T0073773	-	689	-	MGP_NZOHlLtJ_P0073773	186 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0030308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0030308's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0030308	Gfi1	100	48.276	MGP_NZOHlLtJ_G0018784	Zfp672	90	48.276
MGP_NZOHlLtJ_G0030308	Gfi1	100	42.857	MGP_NZOHlLtJ_G0023705	Zscan10	85	42.771
MGP_NZOHlLtJ_G0030308	Gfi1	99	45.714	MGP_NZOHlLtJ_G0032333	Zfp574	61	43.925
MGP_NZOHlLtJ_G0030308	Gfi1	100	46.739	MGP_NZOHlLtJ_G0025063	Zfp236	54	46.739
MGP_NZOHlLtJ_G0030308	Gfi1	99	47.934	MGP_NZOHlLtJ_G0020694	Zkscan4	51	47.934
MGP_NZOHlLtJ_G0030308	Gfi1	100	48.031	MGP_NZOHlLtJ_G0021145	Zfp748	92	48.447
MGP_NZOHlLtJ_G0030308	Gfi1	100	48.031	MGP_NZOHlLtJ_G0032405	Zfp974	88	44.242
MGP_NZOHlLtJ_G0030308	Gfi1	100	45.238	MGP_NZOHlLtJ_G0018832	Zfp867	79	43.023
MGP_NZOHlLtJ_G0030308	Gfi1	99	47.368	MGP_NZOHlLtJ_G0032049	Zfp865	63	47.368
MGP_NZOHlLtJ_G0030308	Gfi1	100	39.535	MGP_NZOHlLtJ_G0034497	Zfp319	93	40.116
MGP_NZOHlLtJ_G0030308	Gfi1	99	45.038	MGP_NZOHlLtJ_G0033548	E430018J23Rik	60	42.197
MGP_NZOHlLtJ_G0030308	Gfi1	99	46.296	MGP_NZOHlLtJ_G0033547	-	60	41.615
MGP_NZOHlLtJ_G0030308	Gfi1	100	54.321	MGP_NZOHlLtJ_G0033545	Zfp768	51	45.517
MGP_NZOHlLtJ_G0030308	Gfi1	100	47.788	MGP_NZOHlLtJ_G0021128	Rslcan18	72	42.045
MGP_NZOHlLtJ_G0030308	Gfi1	100	46.018	MGP_NZOHlLtJ_G0021129	Zfp759	89	42.857
MGP_NZOHlLtJ_G0030308	Gfi1	100	46.457	MGP_NZOHlLtJ_G0034655	Zfp1	60	43.478
MGP_NZOHlLtJ_G0030308	Gfi1	100	50.000	MGP_NZOHlLtJ_G0032299	Zfp111	73	46.591
MGP_NZOHlLtJ_G0030308	Gfi1	100	43.590	MGP_NZOHlLtJ_G0031645	Zfp637	71	42.609
MGP_NZOHlLtJ_G0030308	Gfi1	99	45.133	MGP_NZOHlLtJ_G0031296	Prdm5	74	41.463
MGP_NZOHlLtJ_G0030308	Gfi1	100	45.312	MGP_NZOHlLtJ_G0023675	Zfp677	82	43.195
MGP_NZOHlLtJ_G0030308	Gfi1	99	47.287	MGP_NZOHlLtJ_G0031165	Repin1	91	45.399