EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0030471 (Gene tree)
Gene ID: -
Gene Symbol: Rbm19
Alias: 1200009A02Rik|AV302714|NPO
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 85066 bases
Position: chr5:121735437-121820502
Accession: 1921361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0074573	RRM_1	PF00076.22	1.1e-85	1	5
MGP_NZOHlLtJ_P0074573	RRM_1	PF00076.22	1.1e-85	2	5
MGP_NZOHlLtJ_P0074573	RRM_1	PF00076.22	1.1e-85	3	5
MGP_NZOHlLtJ_P0074573	RRM_1	PF00076.22	1.1e-85	4	5
MGP_NZOHlLtJ_P0074573	RRM_1	PF00076.22	1.1e-85	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0074579	-	485	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0074578	-	635	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0074580	-	1933	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0074581	-	391	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0074582	-	360	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0074573	-	4010	-	MGP_NZOHlLtJ_P0074573	952 (aa)	-	Q8R3C6
MGP_NZOHlLtJ_T0074575	-	3900	-	MGP_NZOHlLtJ_P0074575	870 (aa)	-	-
MGP_NZOHlLtJ_T0074574	-	455	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0074577	-	1396	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0074576	-	600	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0030471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0030471's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0030471	Rbm19	72	36.066	MGP_NZOHlLtJ_G0027313	Pabpc1l	60	35.484
MGP_NZOHlLtJ_G0030471	Rbm19	70	34.667	MGP_NZOHlLtJ_G0023576	Pabpc6	57	34.667
MGP_NZOHlLtJ_G0030471	Rbm19	62	34.667	MGP_NZOHlLtJ_G0022226	Pabpc1	58	34.667
MGP_NZOHlLtJ_G0030471	Rbm19	70	34.667	MGP_NZOHlLtJ_G0024827	Pabpc2	59	34.667