EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0030570 (Gene tree)
Gene ID: -
Gene Symbol: Ddx55
Alias: 2810021H22Rik|Kiaa1595|mKIAA1595
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 15451 bases
Position: chr5:126620754-126636204
Accession: 1915098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0075182	ResIII	PF04851.15	5.6e-07	1	1
MGP_NZOHlLtJ_P0075182	DEAD	PF00270.29	1.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0075183	-	445	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0075182	-	2790	-	MGP_NZOHlLtJ_P0075182	618 (aa)	-	-
MGP_NZOHlLtJ_T0075181	-	3516	-	MGP_NZOHlLtJ_P0075181	135 (aa)	-	Q6ZPL9
MGP_NZOHlLtJ_T0075186	-	824	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0075185	-	1430	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0075184	-	477	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0030570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0030570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0030570	Ddx55	57	35.200	MGP_NZOHlLtJ_G0036083	Ddx3x	54	35.106
MGP_NZOHlLtJ_G0030570	Ddx55	77	36.042	MGP_NZOHlLtJ_G0016852	Ddx18	68	36.192
MGP_NZOHlLtJ_G0030570	Ddx55	57	32.687	MGP_NZOHlLtJ_G0022501	Ddx17	53	32.687
MGP_NZOHlLtJ_G0030570	Ddx55	57	35.635	MGP_NZOHlLtJ_G0021029	Ddx41	55	35.440
MGP_NZOHlLtJ_G0030570	Ddx55	57	30.137	MGP_NZOHlLtJ_G0019742	Ddx5	66	30.137
MGP_NZOHlLtJ_G0030570	Ddx55	73	38.631	MGP_NZOHlLtJ_G0035321	Ddx10	50	38.631
MGP_NZOHlLtJ_G0030570	Ddx55	58	32.044	MGP_NZOHlLtJ_G0035581	Ddx43	53	32.044
MGP_NZOHlLtJ_G0030570	Ddx55	56	31.429	MGP_NZOHlLtJ_G0016981	Ddx59	54	31.429
MGP_NZOHlLtJ_G0030570	Ddx55	57	35.694	MGP_NZOHlLtJ_G0031887	Ddx47	81	35.694
MGP_NZOHlLtJ_G0030570	Ddx55	58	30.303	MGP_NZOHlLtJ_G0018979	Eif4a1	75	31.398
MGP_NZOHlLtJ_G0030570	Ddx55	56	33.056	MGP_NZOHlLtJ_G0034213	Ddx49	92	33.238
MGP_NZOHlLtJ_G0030570	Ddx55	58	30.886	MGP_NZOHlLtJ_G0034586	Ddx28	69	30.886
MGP_NZOHlLtJ_G0030570	Ddx55	57	35.733	MGP_NZOHlLtJ_G0017358	D1Pas1	54	35.733
MGP_NZOHlLtJ_G0030570	Ddx55	57	30.362	MGP_NZOHlLtJ_G0023106	-	93	30.362
MGP_NZOHlLtJ_G0030570	Ddx55	61	30.750	MGP_NZOHlLtJ_G0019295	Ddx52	62	30.750
MGP_NZOHlLtJ_G0030570	Ddx55	72	31.528	MGP_NZOHlLtJ_G0026009	Ddx31	74	31.528