EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0030831 (Gene tree)
Gene ID: -
Gene Symbol: Cpsf4
Alias: 30kDa|C79664|Cpsf30
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 15755 bases
Position: chr5:148511869-148527623
Accession: 1861602
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0076564	zf-CCCH	PF00642.24	1.1e-20	1	2
MGP_NZOHlLtJ_P0076564	zf-CCCH	PF00642.24	1.1e-20	2	2
MGP_NZOHlLtJ_P0076559	zf-CCCH	PF00642.24	3.1e-20	1	2
MGP_NZOHlLtJ_P0076559	zf-CCCH	PF00642.24	3.1e-20	2	2
MGP_NZOHlLtJ_P0076562	zf-CCCH	PF00642.24	3.1e-20	1	2
MGP_NZOHlLtJ_P0076562	zf-CCCH	PF00642.24	3.1e-20	2	2
MGP_NZOHlLtJ_P0076561	zf-CCCH	PF00642.24	6e-20	1	2
MGP_NZOHlLtJ_P0076561	zf-CCCH	PF00642.24	6e-20	2	2
MGP_NZOHlLtJ_P0076560	zf-CCCH	PF00642.24	2.4e-15	1	2
MGP_NZOHlLtJ_P0076560	zf-CCCH	PF00642.24	2.4e-15	2	2
MGP_NZOHlLtJ_P0076560	zf-CCHC	PF00098.23	5.6e-06	1	1
MGP_NZOHlLtJ_P0076559	zf-CCHC	PF00098.23	6.7e-06	1	1
MGP_NZOHlLtJ_P0076562	zf-CCHC	PF00098.23	6.7e-06	1	1
MGP_NZOHlLtJ_P0076561	zf-CCHC	PF00098.23	7.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0076564	-	850	-	MGP_NZOHlLtJ_P0076564	207 (aa)	-	-
MGP_NZOHlLtJ_T0076565	-	2986	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0076560	-	1621	-	MGP_NZOHlLtJ_P0076560	211 (aa)	-	-
MGP_NZOHlLtJ_T0076561	-	1771	-	MGP_NZOHlLtJ_P0076561	269 (aa)	-	-
MGP_NZOHlLtJ_T0076562	-	1402	-	MGP_NZOHlLtJ_P0076562	244 (aa)	-	-
MGP_NZOHlLtJ_T0076563	-	1219	-	MGP_NZOHlLtJ_P0076563	62 (aa)	-	-
MGP_NZOHlLtJ_T0076559	-	1728	XM_006504845	MGP_NZOHlLtJ_P0076559	243 (aa)	XP_006504908	Q8BQZ5

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0030831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0030831	Cpsf4	86	52.358	MGP_NZOHlLtJ_G0019783	Cpsf4l	82	62.400