EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0031187 (Gene tree)
Gene ID: -
Gene Symbol: Tra2a
Alias: 1500010G04Rik|AL022798|G430041M01Rik|mAWMS1
Full Name: transformer 2 alpha homolog (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 22526 bases
Position: chr6:47528732-47551257
Accession: 1933972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0078194	RRM_1	PF00076.22	2.8e-19	1	1
MGP_NZOHlLtJ_P0078197	RRM_1	PF00076.22	2.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0078198	-	3788	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0078197	-	1799	-	MGP_NZOHlLtJ_P0078197	282 (aa)	-	-
MGP_NZOHlLtJ_T0078196	-	3040	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0078195	-	2090	-	MGP_NZOHlLtJ_P0078195	59 (aa)	-	-
MGP_NZOHlLtJ_T0078194	-	1777	XM_006505240	MGP_NZOHlLtJ_P0078194	280 (aa)	XP_006505303	A0A0N4SV13

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0031187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0031187	Tra2a	59	37.097	MGP_NZOHlLtJ_G0029034	Elavl4	72	35.821
MGP_NZOHlLtJ_G0031187	Tra2a	60	59.474	MGP_NZOHlLtJ_G0023095	Tra2b	79	60.484