EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0031200 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa2b1
Alias: 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A
Full Name: heterogeneous nuclear ribonucleoprotein A2/B1
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 8962 bases
Position: chr6:49886762-49895723
Accession: 104819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0078246	RRM_1	PF00076.22	3.3e-32	1	2
MGP_NZOHlLtJ_P0078246	RRM_1	PF00076.22	3.3e-32	2	2
MGP_NZOHlLtJ_P0078252	RRM_1	PF00076.22	3.3e-32	1	2
MGP_NZOHlLtJ_P0078252	RRM_1	PF00076.22	3.3e-32	2	2
MGP_NZOHlLtJ_P0078249	RRM_1	PF00076.22	5e-32	1	2
MGP_NZOHlLtJ_P0078249	RRM_1	PF00076.22	5e-32	2	2
MGP_NZOHlLtJ_P0078253	RRM_1	PF00076.22	5e-32	1	2
MGP_NZOHlLtJ_P0078253	RRM_1	PF00076.22	5e-32	2	2
MGP_NZOHlLtJ_P0078251	RRM_1	PF00076.22	5.6e-32	1	2
MGP_NZOHlLtJ_P0078251	RRM_1	PF00076.22	5.6e-32	2	2
MGP_NZOHlLtJ_P0078255	RRM_1	PF00076.22	1.9e-15	1	1
MGP_NZOHlLtJ_P0078255	HnRNPA1	PF11627.8	1.9e-16	1	1
MGP_NZOHlLtJ_P0078246	HnRNPA1	PF11627.8	2.1e-06	1	1
MGP_NZOHlLtJ_P0078252	HnRNPA1	PF11627.8	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0078257	-	596	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0078247	-	1703	-	MGP_NZOHlLtJ_P0078247	353 (aa)	-	-
MGP_NZOHlLtJ_T0078246	-	1647	XM_006506373	MGP_NZOHlLtJ_P0078246	301 (aa)	XP_006506436	O88569
MGP_NZOHlLtJ_T0078254	-	766	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0078255	-	466	-	MGP_NZOHlLtJ_P0078255	154 (aa)	-	-
MGP_NZOHlLtJ_T0078249	-	1662	-	MGP_NZOHlLtJ_P0078249	341 (aa)	-	-
MGP_NZOHlLtJ_T0078248	-	1542	-	MGP_NZOHlLtJ_P0078248	301 (aa)	-	-
MGP_NZOHlLtJ_T0078250	-	1554	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0078251	-	1728	-	MGP_NZOHlLtJ_P0078251	353 (aa)	-	-
MGP_NZOHlLtJ_T0078252	-	1518	-	MGP_NZOHlLtJ_P0078252	301 (aa)	-	-
MGP_NZOHlLtJ_T0078253	-	1638	-	MGP_NZOHlLtJ_P0078253	341 (aa)	-	-
MGP_NZOHlLtJ_T0078258	-	3645	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0078256	-	706	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0031200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0031200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	59	55.307	MGP_NZOHlLtJ_G0021054	Hnrnpa0	91	49.640
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	91	55.970	MGP_NZOHlLtJ_G0021274	Gm17190	73	58.113
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	60	41.026	MGP_NZOHlLtJ_G0017927	Dazap1	99	40.237
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	56	44.348	MGP_NZOHlLtJ_G0019357	Msi2	100	44.348
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	61	38.068	MGP_NZOHlLtJ_G0018702	Hnrnpab	64	37.368
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	69	31.776	MGP_NZOHlLtJ_G0016473	Boll	64	33.333
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	66	30.348	MGP_NZOHlLtJ_G0029591	Tardbp	94	30.282
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	91	31.034	MGP_NZOHlLtJ_G0036057	Rbm3	67	44.000
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	66	32.143	MGP_NZOHlLtJ_G0035416	Celf6	79	31.250
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	50	44.737	MGP_NZOHlLtJ_G0017921	Cirbp	70	44.737
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	59	82.418	MGP_NZOHlLtJ_G0026332	Hnrnpa3	59	74.257
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	58	38.824	MGP_NZOHlLtJ_G0030246	Hnrnpdl	58	38.542
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	72	41.148	MGP_NZOHlLtJ_G0030244	Hnrnpd	97	44.545
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	91	41.379	MGP_NZOHlLtJ_G0030440	Msi1	61	43.750
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	56	38.554	MGP_NZOHlLtJ_G0036263	Rbmx	90	40.299
MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	82	74.286	MGP_NZOHlLtJ_G0022862	Hnrnpa1	54	68.142