EuRBPDB

Description

Ensembl ID: MGP_NZOHlLtJ_G0031291 (Gene tree)
Gene ID: -
Gene Symbol: Smarcad1
Alias: AV081750|AW226546|D6Pas1|Etl1|Kiaa1122|mKIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 67189 bases
Position: chr6:64062900-64130088
Accession: 95453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0078580	ResIII	PF04851.15	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0078593	-	2526	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0078591	-	3062	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0078590	-	726	-	MGP_NZOHlLtJ_P0078590	45 (aa)	-	-
MGP_NZOHlLtJ_T0078589	-	635	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0078580	-	5168	-	MGP_NZOHlLtJ_P0078580	1021 (aa)	-	-
MGP_NZOHlLtJ_T0078581	-	466	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0078582	-	600	-	MGP_NZOHlLtJ_P0078582	73 (aa)	-	-
MGP_NZOHlLtJ_T0078583	-	734	-	MGP_NZOHlLtJ_P0078583	73 (aa)	-	-
MGP_NZOHlLtJ_T0078579	-	602	XM_006505509	MGP_NZOHlLtJ_P0078579	134 (aa)	XP_006505572	Q04692
MGP_NZOHlLtJ_T0078585	-	739	-	MGP_NZOHlLtJ_P0078585	73 (aa)	-	-
MGP_NZOHlLtJ_T0078586	-	2821	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0078587	-	4179	-	MGP_NZOHlLtJ_P0078587	123 (aa)	-	-
MGP_NZOHlLtJ_T0078588	-	643	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0078584	-	472	-	MGP_NZOHlLtJ_P0078584	68 (aa)	-	-
MGP_NZOHlLtJ_T0078592	-	643	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0031291	Smarcad1	51	37.705	MGP_NZOHlLtJ_G0025569	Hells	66	37.887
MGP_NZOHlLtJ_G0031291	Smarcad1	50	35.135	MGP_NZOHlLtJ_G0028113	Chd1l	51	35.135