EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0031438 (Gene tree)
Gene ID: -
Gene Symbol: Tia1
Alias: 2310050N03Rik|AI256674|TIA-1|Tia|mTIA-1
Full Name: cytotoxic granule-associated RNA binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 29155 bases
Position: chr6:86592367-86621521
Accession: 107914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0079296	RRM_1	PF00076.22	4.5e-68	1	3
MGP_NZOHlLtJ_P0079296	RRM_1	PF00076.22	4.5e-68	2	3
MGP_NZOHlLtJ_P0079296	RRM_1	PF00076.22	4.5e-68	3	3
MGP_NZOHlLtJ_P0079290	RRM_1	PF00076.22	1.9e-67	1	3
MGP_NZOHlLtJ_P0079290	RRM_1	PF00076.22	1.9e-67	2	3
MGP_NZOHlLtJ_P0079290	RRM_1	PF00076.22	1.9e-67	3	3
MGP_NZOHlLtJ_P0079282	RRM_1	PF00076.22	2.1e-67	1	3
MGP_NZOHlLtJ_P0079282	RRM_1	PF00076.22	2.1e-67	2	3
MGP_NZOHlLtJ_P0079282	RRM_1	PF00076.22	2.1e-67	3	3
MGP_NZOHlLtJ_P0079283	RRM_1	PF00076.22	2.1e-67	1	3
MGP_NZOHlLtJ_P0079283	RRM_1	PF00076.22	2.1e-67	2	3
MGP_NZOHlLtJ_P0079283	RRM_1	PF00076.22	2.1e-67	3	3
MGP_NZOHlLtJ_P0079291	RRM_1	PF00076.22	2.3e-58	1	3
MGP_NZOHlLtJ_P0079291	RRM_1	PF00076.22	2.3e-58	2	3
MGP_NZOHlLtJ_P0079291	RRM_1	PF00076.22	2.3e-58	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0079299	-	2660	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079298	-	823	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079293	-	797	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079292	-	1290	-	MGP_NZOHlLtJ_P0079292	93 (aa)	-	-
MGP_NZOHlLtJ_T0079291	-	1445	-	MGP_NZOHlLtJ_P0079291	285 (aa)	-	-
MGP_NZOHlLtJ_T0079290	-	3130	-	MGP_NZOHlLtJ_P0079290	375 (aa)	-	-
MGP_NZOHlLtJ_T0079297	-	864	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079296	-	3108	-	MGP_NZOHlLtJ_P0079296	377 (aa)	-	-
MGP_NZOHlLtJ_T0079295	-	1178	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079294	-	4326	-	MGP_NZOHlLtJ_P0079294	212 (aa)	-	-
MGP_NZOHlLtJ_T0079284	-	933	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079285	-	422	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079286	-	4420	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079287	-	612	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079282	-	1789	XM_006505889	MGP_NZOHlLtJ_P0079282	385 (aa)	XP_006505952	P52912
MGP_NZOHlLtJ_T0079283	-	4477	-	MGP_NZOHlLtJ_P0079283	386 (aa)	-	-
MGP_NZOHlLtJ_T0079288	-	1203	-	MGP_NZOHlLtJ_P0079288	133 (aa)	-	-
MGP_NZOHlLtJ_T0079289	-	3856	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079305	-	2653	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079304	-	877	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079307	-	585	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079306	-	716	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079301	-	750	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079300	-	706	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079303	-	628	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079302	-	759	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0079308	-	597	-	MGP_NZOHlLtJ_P0079308	105 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0031438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0031438's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0031438	Tia1	87	38.095	MGP_NZOHlLtJ_G0028534	-	72	38.095
MGP_NZOHlLtJ_G0031438	Tia1	96	36.905	MGP_NZOHlLtJ_G0023576	Pabpc6	58	36.905
MGP_NZOHlLtJ_G0031438	Tia1	87	38.095	MGP_NZOHlLtJ_G0022226	Pabpc1	57	38.095
MGP_NZOHlLtJ_G0031438	Tia1	77	35.870	MGP_NZOHlLtJ_G0028096	Rbm8a	54	35.870
MGP_NZOHlLtJ_G0031438	Tia1	60	31.285	MGP_NZOHlLtJ_G0029330	Trnau1ap	79	30.198
MGP_NZOHlLtJ_G0031438	Tia1	99	31.579	MGP_NZOHlLtJ_G0033843	Elavl1	95	32.298
MGP_NZOHlLtJ_G0031438	Tia1	69	32.308	MGP_NZOHlLtJ_G0030244	Hnrnpd	55	35.593
MGP_NZOHlLtJ_G0031438	Tia1	80	34.043	MGP_NZOHlLtJ_G0036263	Rbmx	98	34.409
MGP_NZOHlLtJ_G0031438	Tia1	98	31.169	MGP_NZOHlLtJ_G0034984	Elavl3	90	37.179
MGP_NZOHlLtJ_G0031438	Tia1	80	37.778	MGP_NZOHlLtJ_G0017921	Cirbp	91	35.714
MGP_NZOHlLtJ_G0031438	Tia1	71	40.260	MGP_NZOHlLtJ_G0036057	Rbm3	99	35.955
MGP_NZOHlLtJ_G0031438	Tia1	73	35.366	MGP_NZOHlLtJ_G0017281	Rbm8a2	53	35.870
MGP_NZOHlLtJ_G0031438	Tia1	83	35.443	MGP_NZOHlLtJ_G0025805	Celf2	51	35.443
MGP_NZOHlLtJ_G0031438	Tia1	88	34.568	MGP_NZOHlLtJ_G0017995	Celf5	89	32.184
MGP_NZOHlLtJ_G0031438	Tia1	97	86.992	MGP_NZOHlLtJ_G0033595	Tial1	100	87.440
MGP_NZOHlLtJ_G0031438	Tia1	78	36.000	MGP_NZOHlLtJ_G0023153	Ncbp2	51	36.000
MGP_NZOHlLtJ_G0031438	Tia1	93	38.667	MGP_NZOHlLtJ_G0028026	Celf3	77	37.805
MGP_NZOHlLtJ_G0031438	Tia1	85	36.000	MGP_NZOHlLtJ_G0035416	Celf6	62	32.955
MGP_NZOHlLtJ_G0031438	Tia1	89	34.615	MGP_NZOHlLtJ_G0028903	Elavl2	96	34.615
MGP_NZOHlLtJ_G0031438	Tia1	95	33.835	MGP_NZOHlLtJ_G0024827	Pabpc2	57	35.443
MGP_NZOHlLtJ_G0031438	Tia1	87	38.095	MGP_NZOHlLtJ_G0027313	Pabpc1l	59	38.095
MGP_NZOHlLtJ_G0031438	Tia1	95	33.333	MGP_NZOHlLtJ_G0029200	Pabpc4	93	36.905
MGP_NZOHlLtJ_G0031438	Tia1	95	30.000	MGP_NZOHlLtJ_G0027667	Pabpc4l	95	30.539
MGP_NZOHlLtJ_G0031438	Tia1	87	32.911	MGP_NZOHlLtJ_G0024664	Celf4	63	30.682
MGP_NZOHlLtJ_G0031438	Tia1	98	32.895	MGP_NZOHlLtJ_G0029034	Elavl4	94	35.897
MGP_NZOHlLtJ_G0031438	Tia1	85	30.488	MGP_NZOHlLtJ_G0025133	Rbm4b	95	30.488
MGP_NZOHlLtJ_G0031438	Tia1	84	34.247	MGP_NZOHlLtJ_G0036568	Pabpc5	93	33.333