EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0031441 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp1
Alias: WBP17|[a]CP-1|alphaCP-1|hnRNP E1
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 1832 bases
Position: chr6:86714041-86715872
Accession: 1345635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0079318	KH_1	PF00013.29	2.7e-51	1	3
MGP_NZOHlLtJ_P0079318	KH_1	PF00013.29	2.7e-51	2	3
MGP_NZOHlLtJ_P0079318	KH_1	PF00013.29	2.7e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0079318	-	1832	-	MGP_NZOHlLtJ_P0079318	356 (aa)	-	P60335

Gene Model

Click here to download MGP_NZOHlLtJ_G0031441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0031441's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0031441	Pcbp1	70	43.243	MGP_NZOHlLtJ_G0023094	Igf2bp2	69	33.696
MGP_NZOHlLtJ_G0031441	Pcbp1	66	41.558	MGP_NZOHlLtJ_G0032224	Nova2	51	41.558
MGP_NZOHlLtJ_G0031441	Pcbp1	69	34.667	MGP_NZOHlLtJ_G0024398	Khsrp	54	34.667
MGP_NZOHlLtJ_G0031441	Pcbp1	99	68.033	MGP_NZOHlLtJ_G0017824	Pcbp3	99	65.873
MGP_NZOHlLtJ_G0031441	Pcbp1	98	53.541	MGP_NZOHlLtJ_G0035746	-	97	67.826
MGP_NZOHlLtJ_G0031441	Pcbp1	70	40.541	MGP_NZOHlLtJ_G0020143	Nova1	57	40.541
MGP_NZOHlLtJ_G0031441	Pcbp1	85	42.857	MGP_NZOHlLtJ_G0021060	Hnrnpk	78	31.724
MGP_NZOHlLtJ_G0031441	Pcbp1	60	31.169	MGP_NZOHlLtJ_G0026063	Fubp3	88	32.370
MGP_NZOHlLtJ_G0031441	Pcbp1	100	81.744	MGP_NZOHlLtJ_G0022842	Pcbp2	100	81.744