EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0031468 (Gene tree)
Gene ID: -
Gene Symbol: Rab7
Alias: Rab7a
Full Name: RAB7%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 47055 bases
Position: chr6:88260698-88307752
Accession: 105068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0079442	MMR_HSR1	PF01926.23	7.2e-07	1	1
MGP_NZOHlLtJ_P0079443	MMR_HSR1	PF01926.23	7.2e-07	1	1
MGP_NZOHlLtJ_P0079444	MMR_HSR1	PF01926.23	7.2e-07	1	1
MGP_NZOHlLtJ_P0079445	MMR_HSR1	PF01926.23	7.2e-07	1	1
MGP_NZOHlLtJ_P0079446	MMR_HSR1	PF01926.23	7.2e-07	1	1
MGP_NZOHlLtJ_P0079448	MMR_HSR1	PF01926.23	7.7e-07	1	1
MGP_NZOHlLtJ_P0079447	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0079446	-	1273	-	MGP_NZOHlLtJ_P0079446	207 (aa)	-	-
MGP_NZOHlLtJ_T0079447	-	424	-	MGP_NZOHlLtJ_P0079447	88 (aa)	-	-
MGP_NZOHlLtJ_T0079444	-	1846	-	MGP_NZOHlLtJ_P0079444	207 (aa)	-	-
MGP_NZOHlLtJ_T0079445	-	1596	-	MGP_NZOHlLtJ_P0079445	207 (aa)	-	-
MGP_NZOHlLtJ_T0079442	-	2146	-	MGP_NZOHlLtJ_P0079442	207 (aa)	-	P51150
MGP_NZOHlLtJ_T0079443	-	2018	-	MGP_NZOHlLtJ_P0079443	207 (aa)	-	-
MGP_NZOHlLtJ_T0079448	-	550	-	MGP_NZOHlLtJ_P0079448	98 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0031468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0031468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0031468	Rab7	91	46.067	MGP_NZOHlLtJ_G0030446	Rab35	95	34.872
MGP_NZOHlLtJ_G0031468	Rab7	90	48.864	MGP_NZOHlLtJ_G0024437	Rab12	64	36.316
MGP_NZOHlLtJ_G0031468	Rab7	91	47.191	MGP_NZOHlLtJ_G0035708	Rab6b	94	36.683
MGP_NZOHlLtJ_G0031468	Rab7	92	43.333	MGP_NZOHlLtJ_G0023982	Rab11b	72	40.491
MGP_NZOHlLtJ_G0031468	Rab7	91	44.944	MGP_NZOHlLtJ_G0028511	Rab2a	84	36.269
MGP_NZOHlLtJ_G0031468	Rab7	95	59.140	MGP_NZOHlLtJ_G0036792	Rab9	88	54.237
MGP_NZOHlLtJ_G0031468	Rab7	98	39.583	MGP_NZOHlLtJ_G0018498	Rab1a	78	39.264
MGP_NZOHlLtJ_G0031468	Rab7	92	43.333	MGP_NZOHlLtJ_G0017784	Rab36	63	36.571
MGP_NZOHlLtJ_G0031468	Rab7	91	40.449	MGP_NZOHlLtJ_G0022666	Rabl2	71	33.735
MGP_NZOHlLtJ_G0031468	Rab7	91	46.067	MGP_NZOHlLtJ_G0021721	Rab2b	91	36.634
MGP_NZOHlLtJ_G0031468	Rab7	97	35.789	MGP_NZOHlLtJ_G0032059	Rasl2-9	75	33.728
MGP_NZOHlLtJ_G0031468	Rab7	83	35.714	MGP_NZOHlLtJ_G0019639	Arl4d	58	32.520
MGP_NZOHlLtJ_G0031468	Rab7	90	47.727	MGP_NZOHlLtJ_G0019596	Rab5c	77	42.442
MGP_NZOHlLtJ_G0031468	Rab7	94	43.478	MGP_NZOHlLtJ_G0016340	Rab23	70	33.918
MGP_NZOHlLtJ_G0031468	Rab7	93	42.857	MGP_NZOHlLtJ_G0035457	Rab11a	87	38.686
MGP_NZOHlLtJ_G0031468	Rab7	98	60.417	MGP_NZOHlLtJ_G0036637	Rab9b	99	53.202
MGP_NZOHlLtJ_G0031468	Rab7	91	47.191	MGP_NZOHlLtJ_G0033079	Rab6a	94	36.000
MGP_NZOHlLtJ_G0031468	Rab7	90	48.864	MGP_NZOHlLtJ_G0024584	Rab18	92	36.082
MGP_NZOHlLtJ_G0031468	Rab7	91	44.944	MGP_NZOHlLtJ_G0027878	Rab25	75	39.157
MGP_NZOHlLtJ_G0031468	Rab7	94	49.462	MGP_NZOHlLtJ_G0019802	Rab37	76	41.071
MGP_NZOHlLtJ_G0031468	Rab7	92	46.667	MGP_NZOHlLtJ_G0027439	Rab22a	82	40.854
MGP_NZOHlLtJ_G0031468	Rab7	91	42.222	MGP_NZOHlLtJ_G0036210	Rab33a	85	36.111
MGP_NZOHlLtJ_G0031468	Rab7	97	45.263	MGP_NZOHlLtJ_G0024338	Rab5a	81	40.782
MGP_NZOHlLtJ_G0031468	Rab7	66	32.117	MGP_NZOHlLtJ_G0033728	Hras	96	30.808
MGP_NZOHlLtJ_G0031468	Rab7	92	42.222	MGP_NZOHlLtJ_G0033019	Rab30	88	38.043
MGP_NZOHlLtJ_G0031468	Rab7	79	31.169	MGP_NZOHlLtJ_G0035685	Mras	80	33.333
MGP_NZOHlLtJ_G0031468	Rab7	94	35.870	MGP_NZOHlLtJ_G0019993	Dnajc27	60	36.145
MGP_NZOHlLtJ_G0031468	Rab7	100	37.374	MGP_NZOHlLtJ_G0027675	Rab33b	79	36.559
MGP_NZOHlLtJ_G0031468	Rab7	92	47.778	MGP_NZOHlLtJ_G0024428	Rab31	82	44.512
MGP_NZOHlLtJ_G0031468	Rab7	73	33.113	MGP_NZOHlLtJ_G0028159	Nras	95	33.108
MGP_NZOHlLtJ_G0031468	Rab7	98	38.542	MGP_NZOHlLtJ_G0025154	Rab1b	97	34.848
MGP_NZOHlLtJ_G0031468	Rab7	99	40.206	MGP_NZOHlLtJ_G0020291	Rab15	81	33.520
MGP_NZOHlLtJ_G0031468	Rab7	91	37.778	MGP_NZOHlLtJ_G0036387	Rab39b	76	34.545
MGP_NZOHlLtJ_G0031468	Rab7	76	33.121	MGP_NZOHlLtJ_G0031955	Kras	87	33.929