EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0031638 (Gene tree)
Gene ID: -
Gene Symbol: Gm5580
Alias: -
Full Name: predicted pseudogene 5580
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 1108 bases
Position: chr6:117772434-117773541
Accession: 3646594
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0080324	DEAD	PF00270.29	2e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0080324	-	1108	-	MGP_NZOHlLtJ_P0080324	343 (aa)	-	A0A0N4SVP8

Gene Model

Click here to download MGP_NZOHlLtJ_G0031638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0031638's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0031638	Gm5580	78	32.042	MGP_NZOHlLtJ_G0019742	Ddx5	68	32.042
MGP_NZOHlLtJ_G0031638	Gm5580	83	38.062	MGP_NZOHlLtJ_G0024083	Ddx39b	67	38.062
MGP_NZOHlLtJ_G0031638	Gm5580	83	37.586	MGP_NZOHlLtJ_G0034352	Ddx39	76	41.509
MGP_NZOHlLtJ_G0031638	Gm5580	72	85.830	MGP_NZOHlLtJ_G0031637	Gm8994	85	85.830
MGP_NZOHlLtJ_G0031638	Gm5580	87	35.312	MGP_NZOHlLtJ_G0034644	Ddx19a	64	35.312
MGP_NZOHlLtJ_G0031638	Gm5580	87	36.039	MGP_NZOHlLtJ_G0034645	Ddx19b	63	36.039
MGP_NZOHlLtJ_G0031638	Gm5580	95	97.546	MGP_NZOHlLtJ_G0019909	Eif4a3	100	90.938
MGP_NZOHlLtJ_G0031638	Gm5580	80	37.143	MGP_NZOHlLtJ_G0035046	Ddx25	62	36.842
MGP_NZOHlLtJ_G0031638	Gm5580	88	76.364	MGP_NZOHlLtJ_G0023106	-	83	69.536
MGP_NZOHlLtJ_G0031638	Gm5580	66	30.000	MGP_NZOHlLtJ_G0018451	Ddx56	92	30.000
MGP_NZOHlLtJ_G0031638	Gm5580	70	31.120	MGP_NZOHlLtJ_G0031887	Ddx47	66	35.593
MGP_NZOHlLtJ_G0031638	Gm5580	88	68.543	MGP_NZOHlLtJ_G0018979	Eif4a1	63	68.543