EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0032441 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpl
Alias: C79783|D830027H13Rik|Hnrpl
Full Name: heterogeneous nuclear ribonucleoprotein L
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 13638 bases
Position: chr7:27132901-27146538
Accession: 104816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0083457	RRM_5	PF13893.6	2.4e-60	1	2
MGP_NZOHlLtJ_P0083457	RRM_5	PF13893.6	2.4e-60	2	2
MGP_NZOHlLtJ_P0083461	RRM_5	PF13893.6	2.4e-60	1	2
MGP_NZOHlLtJ_P0083461	RRM_5	PF13893.6	2.4e-60	2	2
MGP_NZOHlLtJ_P0083462	RRM_5	PF13893.6	3e-60	1	2
MGP_NZOHlLtJ_P0083462	RRM_5	PF13893.6	3e-60	2	2
MGP_NZOHlLtJ_P0083459	RRM_5	PF13893.6	2e-59	1	2
MGP_NZOHlLtJ_P0083459	RRM_5	PF13893.6	2e-59	2	2
MGP_NZOHlLtJ_P0083457	RRM_1	PF00076.22	3.3e-22	1	2
MGP_NZOHlLtJ_P0083457	RRM_1	PF00076.22	3.3e-22	2	2
MGP_NZOHlLtJ_P0083461	RRM_1	PF00076.22	3.3e-22	1	2
MGP_NZOHlLtJ_P0083461	RRM_1	PF00076.22	3.3e-22	2	2
MGP_NZOHlLtJ_P0083462	RRM_1	PF00076.22	4.2e-22	1	2
MGP_NZOHlLtJ_P0083462	RRM_1	PF00076.22	4.2e-22	2	2
MGP_NZOHlLtJ_P0083459	RRM_1	PF00076.22	1.6e-16	1	1
MGP_NZOHlLtJ_P0083460	RRM_1	PF00076.22	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0083469	-	672	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0083468	-	768	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0083461	-	2142	-	MGP_NZOHlLtJ_P0083461	586 (aa)	-	-
MGP_NZOHlLtJ_T0083460	-	502	-	MGP_NZOHlLtJ_P0083460	112 (aa)	-	-
MGP_NZOHlLtJ_T0083463	-	2426	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0083462	-	2180	-	MGP_NZOHlLtJ_P0083462	614 (aa)	-	-
MGP_NZOHlLtJ_T0083465	-	504	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0083464	-	1850	-	MGP_NZOHlLtJ_P0083464	201 (aa)	-	-
MGP_NZOHlLtJ_T0083467	-	1087	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0083466	-	637	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0083457	-	2679	XM_006539556	MGP_NZOHlLtJ_P0083457	586 (aa)	XP_006539619	Q8R081
MGP_NZOHlLtJ_T0083458	-	2275	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0083459	-	1898	-	MGP_NZOHlLtJ_P0083459	456 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0032441's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0032441	Hnrnpl	100	63.393	MGP_NZOHlLtJ_G0024503	Hnrnpll	79	58.065
MGP_NZOHlLtJ_G0032441	Hnrnpl	95	30.045	MGP_NZOHlLtJ_G0017898	Ptbp1	80	30.583
MGP_NZOHlLtJ_G0032441	Hnrnpl	55	36.207	MGP_NZOHlLtJ_G0028793	Ptbp3	83	35.537
MGP_NZOHlLtJ_G0032441	Hnrnpl	77	30.645	MGP_NZOHlLtJ_G0028298	Ptbp2	77	30.645