EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0032468 (Gene tree)
Gene ID: -
Gene Symbol: Zfp420
Alias: B230119D13|B230312I18Rik|mszf59-1|mszf70
Full Name: zinc finger protein 420
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 15667 bases
Position: chr7:28260399-28276065
Accession: 2444666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_NZOHlLtJ_P0083586	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_NZOHlLtJ_P0083589	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_NZOHlLtJ_P0083586	zf-met	PF12874.7	8.4e-08	1	1
MGP_NZOHlLtJ_P0083589	zf-met	PF12874.7	8.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0083590	-	764	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0083588	-	2976	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0083589	-	2744	-	MGP_NZOHlLtJ_P0083589	578 (aa)	-	-
MGP_NZOHlLtJ_T0083586	-	2537	XM_006539873	MGP_NZOHlLtJ_P0083586	578 (aa)	XP_006539936	Q7TMN8
MGP_NZOHlLtJ_T0083587	-	689	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0032468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0032468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0032468	Zfp420	97	48.113	MGP_NZOHlLtJ_G0033547	-	60	48.113
MGP_NZOHlLtJ_G0032468	Zfp420	99	51.196	MGP_NZOHlLtJ_G0021129	Zfp759	88	50.364
MGP_NZOHlLtJ_G0032468	Zfp420	98	56.275	MGP_NZOHlLtJ_G0021128	Rslcan18	71	56.275
MGP_NZOHlLtJ_G0032468	Zfp420	98	46.711	MGP_NZOHlLtJ_G0031165	Repin1	93	46.711
MGP_NZOHlLtJ_G0032468	Zfp420	98	55.470	MGP_NZOHlLtJ_G0021145	Zfp748	93	55.470
MGP_NZOHlLtJ_G0032468	Zfp420	99	52.878	MGP_NZOHlLtJ_G0032405	Zfp974	88	52.878
MGP_NZOHlLtJ_G0032468	Zfp420	98	51.882	MGP_NZOHlLtJ_G0018832	Zfp867	82	51.882
MGP_NZOHlLtJ_G0032468	Zfp420	98	44.809	MGP_NZOHlLtJ_G0031750	Zfp384	51	44.809
MGP_NZOHlLtJ_G0032468	Zfp420	98	56.342	MGP_NZOHlLtJ_G0023686	Zfp820	94	56.342
MGP_NZOHlLtJ_G0032468	Zfp420	97	53.731	MGP_NZOHlLtJ_G0023687	Zfp947	95	53.731
MGP_NZOHlLtJ_G0032468	Zfp420	99	59.854	MGP_NZOHlLtJ_G0032591	-	78	59.854
MGP_NZOHlLtJ_G0032468	Zfp420	98	50.000	MGP_NZOHlLtJ_G0034279	Zfp882	85	50.000
MGP_NZOHlLtJ_G0032468	Zfp420	98	37.309	MGP_NZOHlLtJ_G0034497	Zfp319	93	36.919
MGP_NZOHlLtJ_G0032468	Zfp420	98	54.167	MGP_NZOHlLtJ_G0031645	Zfp637	75	54.167
MGP_NZOHlLtJ_G0032468	Zfp420	99	50.270	MGP_NZOHlLtJ_G0023698	Zfp945	98	51.032
MGP_NZOHlLtJ_G0032468	Zfp420	99	52.489	MGP_NZOHlLtJ_G0027372	Zfp334	75	51.716
MGP_NZOHlLtJ_G0032468	Zfp420	98	49.524	MGP_NZOHlLtJ_G0018784	Zfp672	89	49.524
MGP_NZOHlLtJ_G0032468	Zfp420	98	55.274	MGP_NZOHlLtJ_G0032299	Zfp111	74	55.274
MGP_NZOHlLtJ_G0032468	Zfp420	98	53.074	MGP_NZOHlLtJ_G0032296	Zfp112	67	53.074
MGP_NZOHlLtJ_G0032468	Zfp420	99	47.059	MGP_NZOHlLtJ_G0025063	Zfp236	79	47.059
MGP_NZOHlLtJ_G0032468	Zfp420	99	54.233	MGP_NZOHlLtJ_G0034991	Zfp872	86	53.608
MGP_NZOHlLtJ_G0032468	Zfp420	98	55.210	MGP_NZOHlLtJ_G0023677	Zfp51	88	55.210
MGP_NZOHlLtJ_G0032468	Zfp420	98	59.532	MGP_NZOHlLtJ_G0018688	Zfp454	71	57.803
MGP_NZOHlLtJ_G0032468	Zfp420	99	51.052	MGP_NZOHlLtJ_G0032611	Zfp715	71	51.316
MGP_NZOHlLtJ_G0032468	Zfp420	97	41.080	MGP_NZOHlLtJ_G0023705	Zscan10	78	40.179
MGP_NZOHlLtJ_G0032468	Zfp420	98	54.648	MGP_NZOHlLtJ_G0023675	Zfp677	89	54.648
MGP_NZOHlLtJ_G0032468	Zfp420	95	59.426	MGP_NZOHlLtJ_G0026939	Zfp661	72	59.426
MGP_NZOHlLtJ_G0032468	Zfp420	99	55.556	MGP_NZOHlLtJ_G0032301	Zfp108	79	55.556
MGP_NZOHlLtJ_G0032468	Zfp420	99	57.095	MGP_NZOHlLtJ_G0032303	Zfp94	82	57.095
MGP_NZOHlLtJ_G0032468	Zfp420	99	56.356	MGP_NZOHlLtJ_G0032302	Zfp61	59	56.356
MGP_NZOHlLtJ_G0032468	Zfp420	98	48.744	MGP_NZOHlLtJ_G0029971	Zbtb49	89	50.000
MGP_NZOHlLtJ_G0032468	Zfp420	99	60.645	MGP_NZOHlLtJ_G0020694	Zkscan4	73	53.712
MGP_NZOHlLtJ_G0032468	Zfp420	99	57.143	MGP_NZOHlLtJ_G0018696	Zfp354a	76	57.143
MGP_NZOHlLtJ_G0032468	Zfp420	95	30.691	MGP_NZOHlLtJ_G0032050	-	66	31.343
MGP_NZOHlLtJ_G0032468	Zfp420	99	37.634	MGP_NZOHlLtJ_G0032049	Zfp865	80	37.634
MGP_NZOHlLtJ_G0032468	Zfp420	98	38.136	MGP_NZOHlLtJ_G0032041	Zfp628	60	38.748
MGP_NZOHlLtJ_G0032468	Zfp420	99	56.115	MGP_NZOHlLtJ_G0033545	Zfp768	51	56.071
MGP_NZOHlLtJ_G0032468	Zfp420	98	47.967	MGP_NZOHlLtJ_G0033548	E430018J23Rik	67	47.967
MGP_NZOHlLtJ_G0032468	Zfp420	99	57.692	MGP_NZOHlLtJ_G0034655	Zfp1	78	57.692
MGP_NZOHlLtJ_G0032468	Zfp420	99	36.677	MGP_NZOHlLtJ_G0032333	Zfp574	93	37.533
MGP_NZOHlLtJ_G0032468	Zfp420	97	44.706	MGP_NZOHlLtJ_G0029511	Zbtb17	69	44.706
MGP_NZOHlLtJ_G0032468	Zfp420	95	41.722	MGP_NZOHlLtJ_G0031296	Prdm5	91	48.387
MGP_NZOHlLtJ_G0032468	Zfp420	98	39.286	MGP_NZOHlLtJ_G0027410	Zfp64	69	36.504
MGP_NZOHlLtJ_G0032468	Zfp420	99	60.656	MGP_NZOHlLtJ_G0022440	Zfp251	78	60.656