EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NZOHlLtJ_G0032716 (Gene tree)
Gene ID
-
Gene Symbol
Snrnp70
Alias
2700022N21Rik|3200002N22Rik|AI325098|R74807|Rnu1p70|Rnulp70|Snrp70|Snrp70 {ECO:0000313|EMBL:EDL22845.1,GN ECO:0000313|MGI:MGI:98341}|Srnp70|U1-70|U1-70K
Full Name
small nuclear ribonucleoprotein 70 (U1)
Gene Type
protein_coding
Species
Mus_musculus_nzohlltj
Status
putative
Strand
Minus strand
Length
20865 bases
Position
chr7:45210033-45230897
Accession
98341
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NZOHlLtJ_P0084594RRM_1PF00076.221.1e-1711
MGP_NZOHlLtJ_P0084603RRM_1PF00076.224.1e-1311
MGP_NZOHlLtJ_P0084595RRM_1PF00076.222.2e-0811
MGP_NZOHlLtJ_P0084605U1snRNP70_NPF12220.85.6e-2911
MGP_NZOHlLtJ_P0084603U1snRNP70_NPF12220.81.5e-2811
MGP_NZOHlLtJ_P0084594U1snRNP70_NPF12220.81.9e-2711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NZOHlLtJ_T0084608-579--- (aa)--
MGP_NZOHlLtJ_T0084600-733--- (aa)--
MGP_NZOHlLtJ_T0084601-623--- (aa)--
MGP_NZOHlLtJ_T0084602-616-MGP_NZOHlLtJ_P0084602111 (aa)--
MGP_NZOHlLtJ_T0084603-618-MGP_NZOHlLtJ_P0084603168 (aa)--
MGP_NZOHlLtJ_T0084604-601--- (aa)--
MGP_NZOHlLtJ_T0084605-620-MGP_NZOHlLtJ_P0084605109 (aa)--
MGP_NZOHlLtJ_T0084606-212--- (aa)--
MGP_NZOHlLtJ_T0084607-1897--- (aa)--
MGP_NZOHlLtJ_T0084594-1712XM_006540732MGP_NZOHlLtJ_P0084594440 (aa)XP_006540795Q62376
MGP_NZOHlLtJ_T0084595-452-MGP_NZOHlLtJ_P008459586 (aa)--
MGP_NZOHlLtJ_T0084596-3987--- (aa)--
MGP_NZOHlLtJ_T0084597-3014--- (aa)--
MGP_NZOHlLtJ_T0084598-701-MGP_NZOHlLtJ_P0084598115 (aa)--
MGP_NZOHlLtJ_T0084599-2924--- (aa)--
Gene Model
Click here to download MGP_NZOHlLtJ_G0032716's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0032716's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NZOHlLtJ_G0032716Snrnp707046.667MGP_NZOHlLtJ_G0030567Snrnp356148.649
MGP_NZOHlLtJ_G0032716Snrnp705235.000MGP_NZOHlLtJ_G0016473Boll5832.911

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