EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0033079 (Gene tree)
Gene ID: -
Gene Symbol: Rab6a
Alias: 2610028L11Rik|AA419671|Rab6|Rab6 {ECO:0000313|EMBL:EDL16462.1,GN ECO:0000313|MGI:MGI:894313}|Rab6 {ECO:0000313|EMBL:EDL16464.1,GN ECO:0000313|MGI:MGI:894313}|Rab6A
Full Name: RAB6A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 35586 bases
Position: chr7:102558711-102594296
Accession: 894313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0086056	MMR_HSR1	PF01926.23	9.2e-05	1	1
MGP_NZOHlLtJ_P0086057	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0086057	-	3103	-	MGP_NZOHlLtJ_P0086057	208 (aa)	-	-
MGP_NZOHlLtJ_T0086056	-	3207	-	MGP_NZOHlLtJ_P0086056	208 (aa)	-	-
MGP_NZOHlLtJ_T0086055	-	2610	-	MGP_NZOHlLtJ_P0086055	175 (aa)	-	P35279
MGP_NZOHlLtJ_T0086058	-	567	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0033079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0033079's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0033079	Rab6a	77	40.828	MGP_NZOHlLtJ_G0021721	Rab2b	79	43.421
MGP_NZOHlLtJ_G0033079	Rab6a	76	32.500	MGP_NZOHlLtJ_G0035685	Mras	76	32.500
MGP_NZOHlLtJ_G0033079	Rab6a	93	35.000	MGP_NZOHlLtJ_G0036792	Rab9	96	35.000
MGP_NZOHlLtJ_G0033079	Rab6a	98	41.546	MGP_NZOHlLtJ_G0024338	Rab5a	95	41.546
MGP_NZOHlLtJ_G0033079	Rab6a	90	36.458	MGP_NZOHlLtJ_G0020291	Rab15	91	36.458
MGP_NZOHlLtJ_G0033079	Rab6a	94	36.000	MGP_NZOHlLtJ_G0031468	Rab7	91	47.191
MGP_NZOHlLtJ_G0033079	Rab6a	80	38.922	MGP_NZOHlLtJ_G0024428	Rab31	86	38.922
MGP_NZOHlLtJ_G0033079	Rab6a	94	35.784	MGP_NZOHlLtJ_G0027675	Rab33b	86	35.784
MGP_NZOHlLtJ_G0033079	Rab6a	75	32.911	MGP_NZOHlLtJ_G0028159	Nras	98	33.557
MGP_NZOHlLtJ_G0033079	Rab6a	84	35.955	MGP_NZOHlLtJ_G0035457	Rab11a	84	38.281
MGP_NZOHlLtJ_G0033079	Rab6a	95	30.151	MGP_NZOHlLtJ_G0033728	Hras	98	30.151
MGP_NZOHlLtJ_G0033079	Rab6a	75	39.623	MGP_NZOHlLtJ_G0036387	Rab39b	75	39.623
MGP_NZOHlLtJ_G0033079	Rab6a	94	38.384	MGP_NZOHlLtJ_G0018498	Rab1a	94	38.384
MGP_NZOHlLtJ_G0033079	Rab6a	91	38.462	MGP_NZOHlLtJ_G0028511	Rab2a	89	38.462
MGP_NZOHlLtJ_G0033079	Rab6a	77	30.769	MGP_NZOHlLtJ_G0030847	Rasl11a	69	30.769
MGP_NZOHlLtJ_G0033079	Rab6a	76	40.252	MGP_NZOHlLtJ_G0024437	Rab12	55	40.252
MGP_NZOHlLtJ_G0033079	Rab6a	100	90.865	MGP_NZOHlLtJ_G0035708	Rab6b	100	90.865
MGP_NZOHlLtJ_G0033079	Rab6a	81	39.053	MGP_NZOHlLtJ_G0027439	Rab22a	87	39.053
MGP_NZOHlLtJ_G0033079	Rab6a	79	33.721	MGP_NZOHlLtJ_G0036637	Rab9b	84	33.721
MGP_NZOHlLtJ_G0033079	Rab6a	75	35.625	MGP_NZOHlLtJ_G0029820	Rheb	85	35.625
MGP_NZOHlLtJ_G0033079	Rab6a	84	44.000	MGP_NZOHlLtJ_G0019596	Rab5c	81	44.000
MGP_NZOHlLtJ_G0033079	Rab6a	76	39.873	MGP_NZOHlLtJ_G0016340	Rab23	66	39.873
MGP_NZOHlLtJ_G0033079	Rab6a	95	37.561	MGP_NZOHlLtJ_G0036210	Rab33a	86	37.561
MGP_NZOHlLtJ_G0033079	Rab6a	77	42.857	MGP_NZOHlLtJ_G0033019	Rab30	79	42.857
MGP_NZOHlLtJ_G0033079	Rab6a	56	30.000	MGP_NZOHlLtJ_G0019639	Arl4d	58	30.000
MGP_NZOHlLtJ_G0033079	Rab6a	88	31.915	MGP_NZOHlLtJ_G0022666	Rabl2	83	31.915
MGP_NZOHlLtJ_G0033079	Rab6a	88	34.239	MGP_NZOHlLtJ_G0027878	Rab25	86	34.239
MGP_NZOHlLtJ_G0033079	Rab6a	77	42.857	MGP_NZOHlLtJ_G0019802	Rab37	75	42.857
MGP_NZOHlLtJ_G0033079	Rab6a	74	39.610	MGP_NZOHlLtJ_G0030446	Rab35	89	35.789
MGP_NZOHlLtJ_G0033079	Rab6a	93	38.384	MGP_NZOHlLtJ_G0025154	Rab1b	96	38.384
MGP_NZOHlLtJ_G0033079	Rab6a	75	38.217	MGP_NZOHlLtJ_G0023982	Rab11b	72	38.217
MGP_NZOHlLtJ_G0033079	Rab6a	75	32.278	MGP_NZOHlLtJ_G0031955	Kras	83	32.278
MGP_NZOHlLtJ_G0033079	Rab6a	94	36.150	MGP_NZOHlLtJ_G0017784	Rab36	80	36.150
MGP_NZOHlLtJ_G0033079	Rab6a	85	37.634	MGP_NZOHlLtJ_G0019199	Rab34	72	37.634
MGP_NZOHlLtJ_G0033079	Rab6a	95	36.634	MGP_NZOHlLtJ_G0024584	Rab18	94	36.634