EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0033473 (Gene tree)
Gene ID: -
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6
Full Name: trinucleotide repeat containing 6a
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 72556 bases
Position: chr7:126107877-126180432
Accession: 2385292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0087164	Ago_hook	PF10427.9	3.4e-19	1	1
MGP_NZOHlLtJ_P0087161	Ago_hook	PF10427.9	1.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0087159	-	643	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0087168	-	463	-	MGP_NZOHlLtJ_P0087168	154 (aa)	-	-
MGP_NZOHlLtJ_T0087169	-	3297	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0087164	-	5223	-	MGP_NZOHlLtJ_P0087164	1397 (aa)	-	-
MGP_NZOHlLtJ_T0087165	-	4312	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0087166	-	939	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0087167	-	606	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0087160	-	313	-	MGP_NZOHlLtJ_P0087160	53 (aa)	-	-
MGP_NZOHlLtJ_T0087161	-	8137	-	MGP_NZOHlLtJ_P0087161	1880 (aa)	-	-
MGP_NZOHlLtJ_T0087162	-	3577	-	MGP_NZOHlLtJ_P0087162	35 (aa)	-	-
MGP_NZOHlLtJ_T0087163	-	1783	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0033473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0033473	Tnrc6a	99	39.671	MGP_NZOHlLtJ_G0022527	Tnrc6b	98	37.120
MGP_NZOHlLtJ_G0033473	Tnrc6a	98	44.685	MGP_NZOHlLtJ_G0019879	Tnrc6c	99	40.645