EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0033548 (Gene tree)
Gene ID: -
Gene Symbol: E430018J23Rik
Alias: AI480612
Full Name: RIKEN cDNA E430018J23 gene
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 3006 bases
Position: chr7:130511928-130514933
Accession: 2141981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0087598	zf-C2H2	PF00096.26	1.8e-48	1	9
MGP_NZOHlLtJ_P0087598	zf-C2H2	PF00096.26	1.8e-48	2	9
MGP_NZOHlLtJ_P0087598	zf-C2H2	PF00096.26	1.8e-48	3	9
MGP_NZOHlLtJ_P0087598	zf-C2H2	PF00096.26	1.8e-48	4	9
MGP_NZOHlLtJ_P0087598	zf-C2H2	PF00096.26	1.8e-48	5	9
MGP_NZOHlLtJ_P0087598	zf-C2H2	PF00096.26	1.8e-48	6	9
MGP_NZOHlLtJ_P0087598	zf-C2H2	PF00096.26	1.8e-48	7	9
MGP_NZOHlLtJ_P0087598	zf-C2H2	PF00096.26	1.8e-48	8	9
MGP_NZOHlLtJ_P0087598	zf-C2H2	PF00096.26	1.8e-48	9	9
MGP_NZOHlLtJ_P0087598	zf-met	PF12874.7	7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0087599	-	2063	-	MGP_NZOHlLtJ_P0087599	149 (aa)	-	-
MGP_NZOHlLtJ_T0087598	-	2373	XM_006507163	MGP_NZOHlLtJ_P0087598	461 (aa)	XP_006507226	D3Z3V4

Gene Model

Click here to download MGP_NZOHlLtJ_G0033548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0033548's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0033548	E430018J23Rik	86	35.381	MGP_NZOHlLtJ_G0034655	Zfp1	98	35.381
MGP_NZOHlLtJ_G0033548	E430018J23Rik	57	44.086	MGP_NZOHlLtJ_G0032333	Zfp574	71	38.961
MGP_NZOHlLtJ_G0033548	E430018J23Rik	89	46.341	MGP_NZOHlLtJ_G0018696	Zfp354a	100	46.341
MGP_NZOHlLtJ_G0033548	E430018J23Rik	86	39.583	MGP_NZOHlLtJ_G0018832	Zfp867	95	39.583
MGP_NZOHlLtJ_G0033548	E430018J23Rik	67	47.967	MGP_NZOHlLtJ_G0032468	Zfp420	98	47.967
MGP_NZOHlLtJ_G0033548	E430018J23Rik	60	47.511	MGP_NZOHlLtJ_G0033545	Zfp768	50	47.321
MGP_NZOHlLtJ_G0033548	E430018J23Rik	97	63.702	MGP_NZOHlLtJ_G0033547	-	100	63.702
MGP_NZOHlLtJ_G0033548	E430018J23Rik	62	45.299	MGP_NZOHlLtJ_G0032301	Zfp108	99	45.299
MGP_NZOHlLtJ_G0033548	E430018J23Rik	85	46.119	MGP_NZOHlLtJ_G0032303	Zfp94	96	46.119
MGP_NZOHlLtJ_G0033548	E430018J23Rik	86	41.045	MGP_NZOHlLtJ_G0034991	Zfp872	99	40.755
MGP_NZOHlLtJ_G0033548	E430018J23Rik	58	42.177	MGP_NZOHlLtJ_G0025063	Zfp236	58	42.177
MGP_NZOHlLtJ_G0033548	E430018J23Rik	71	37.838	MGP_NZOHlLtJ_G0031296	Prdm5	74	37.838
MGP_NZOHlLtJ_G0033548	E430018J23Rik	61	41.778	MGP_NZOHlLtJ_G0020694	Zkscan4	56	43.363
MGP_NZOHlLtJ_G0033548	E430018J23Rik	91	47.445	MGP_NZOHlLtJ_G0023677	Zfp51	95	45.339
MGP_NZOHlLtJ_G0033548	E430018J23Rik	92	41.985	MGP_NZOHlLtJ_G0023675	Zfp677	99	41.985
MGP_NZOHlLtJ_G0033548	E430018J23Rik	87	44.000	MGP_NZOHlLtJ_G0027372	Zfp334	99	44.000
MGP_NZOHlLtJ_G0033548	E430018J23Rik	64	43.254	MGP_NZOHlLtJ_G0023705	Zscan10	78	43.254
MGP_NZOHlLtJ_G0033548	E430018J23Rik	61	44.498	MGP_NZOHlLtJ_G0031165	Repin1	92	44.076
MGP_NZOHlLtJ_G0033548	E430018J23Rik	86	43.798	MGP_NZOHlLtJ_G0034279	Zfp882	99	43.798
MGP_NZOHlLtJ_G0033548	E430018J23Rik	79	46.565	MGP_NZOHlLtJ_G0032591	-	61	46.565
MGP_NZOHlLtJ_G0033548	E430018J23Rik	92	42.073	MGP_NZOHlLtJ_G0023698	Zfp945	98	42.073
MGP_NZOHlLtJ_G0033548	E430018J23Rik	62	45.000	MGP_NZOHlLtJ_G0029971	Zbtb49	64	47.945
MGP_NZOHlLtJ_G0033548	E430018J23Rik	88	42.647	MGP_NZOHlLtJ_G0021129	Zfp759	99	42.373
MGP_NZOHlLtJ_G0033548	E430018J23Rik	90	47.390	MGP_NZOHlLtJ_G0021128	Rslcan18	82	47.390
MGP_NZOHlLtJ_G0033548	E430018J23Rik	69	36.765	MGP_NZOHlLtJ_G0034497	Zfp319	93	39.245
MGP_NZOHlLtJ_G0033548	E430018J23Rik	57	41.593	MGP_NZOHlLtJ_G0032405	Zfp974	88	41.593
MGP_NZOHlLtJ_G0033548	E430018J23Rik	60	42.197	MGP_NZOHlLtJ_G0030308	Gfi1	99	45.038
MGP_NZOHlLtJ_G0033548	E430018J23Rik	85	44.697	MGP_NZOHlLtJ_G0021145	Zfp748	99	44.697
MGP_NZOHlLtJ_G0033548	E430018J23Rik	89	47.895	MGP_NZOHlLtJ_G0026939	Zfp661	94	42.286
MGP_NZOHlLtJ_G0033548	E430018J23Rik	90	50.382	MGP_NZOHlLtJ_G0022440	Zfp251	94	50.382
MGP_NZOHlLtJ_G0033548	E430018J23Rik	74	47.410	MGP_NZOHlLtJ_G0032296	Zfp112	63	47.410
MGP_NZOHlLtJ_G0033548	E430018J23Rik	89	46.964	MGP_NZOHlLtJ_G0032299	Zfp111	98	46.964
MGP_NZOHlLtJ_G0033548	E430018J23Rik	71	32.389	MGP_NZOHlLtJ_G0027410	Zfp64	70	32.389
MGP_NZOHlLtJ_G0033548	E430018J23Rik	54	38.421	MGP_NZOHlLtJ_G0019420	Zfp652	51	32.808
MGP_NZOHlLtJ_G0033548	E430018J23Rik	57	44.503	MGP_NZOHlLtJ_G0031645	Zfp637	84	44.330
MGP_NZOHlLtJ_G0033548	E430018J23Rik	79	45.070	MGP_NZOHlLtJ_G0032611	Zfp715	73	45.070
MGP_NZOHlLtJ_G0033548	E430018J23Rik	61	42.798	MGP_NZOHlLtJ_G0018784	Zfp672	90	42.105
MGP_NZOHlLtJ_G0033548	E430018J23Rik	60	48.421	MGP_NZOHlLtJ_G0032041	Zfp628	60	47.264
MGP_NZOHlLtJ_G0033548	E430018J23Rik	59	48.341	MGP_NZOHlLtJ_G0032302	Zfp61	52	48.341
MGP_NZOHlLtJ_G0033548	E430018J23Rik	89	45.385	MGP_NZOHlLtJ_G0018688	Zfp454	99	45.385
MGP_NZOHlLtJ_G0033548	E430018J23Rik	60	35.593	MGP_NZOHlLtJ_G0032049	Zfp865	72	35.593
MGP_NZOHlLtJ_G0033548	E430018J23Rik	89	42.248	MGP_NZOHlLtJ_G0023686	Zfp820	95	42.248
MGP_NZOHlLtJ_G0033548	E430018J23Rik	89	42.935	MGP_NZOHlLtJ_G0023687	Zfp947	97	42.143