EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0033595 (Gene tree)
Gene ID: -
Gene Symbol: Tial1
Alias: 5330433G13Rik|AL033329|TIAR|mTIAR
Full Name: Tia1 cytotoxic granule-associated RNA binding protein-like 1
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 21812 bases
Position: chr7:131641567-131663378
Accession: 107913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0087853	RRM_1	PF00076.22	2.2e-63	1	3
MGP_NZOHlLtJ_P0087853	RRM_1	PF00076.22	2.2e-63	2	3
MGP_NZOHlLtJ_P0087853	RRM_1	PF00076.22	2.2e-63	3	3
MGP_NZOHlLtJ_P0087857	RRM_1	PF00076.22	2.2e-63	1	3
MGP_NZOHlLtJ_P0087857	RRM_1	PF00076.22	2.2e-63	2	3
MGP_NZOHlLtJ_P0087857	RRM_1	PF00076.22	2.2e-63	3	3
MGP_NZOHlLtJ_P0087850	RRM_1	PF00076.22	3.2e-60	1	3
MGP_NZOHlLtJ_P0087850	RRM_1	PF00076.22	3.2e-60	2	3
MGP_NZOHlLtJ_P0087850	RRM_1	PF00076.22	3.2e-60	3	3
MGP_NZOHlLtJ_P0087852	RRM_1	PF00076.22	7.6e-51	1	3
MGP_NZOHlLtJ_P0087852	RRM_1	PF00076.22	7.6e-51	2	3
MGP_NZOHlLtJ_P0087852	RRM_1	PF00076.22	7.6e-51	3	3
MGP_NZOHlLtJ_P0087858	RRM_1	PF00076.22	1.8e-26	1	2
MGP_NZOHlLtJ_P0087858	RRM_1	PF00076.22	1.8e-26	2	2
MGP_NZOHlLtJ_P0087855	RRM_1	PF00076.22	2.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0087858	-	1344	-	MGP_NZOHlLtJ_P0087858	244 (aa)	-	-
MGP_NZOHlLtJ_T0087859	-	784	-	MGP_NZOHlLtJ_P0087859	41 (aa)	-	-
MGP_NZOHlLtJ_T0087863	-	674	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0087862	-	1808	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0087861	-	804	-	MGP_NZOHlLtJ_P0087861	140 (aa)	-	-
MGP_NZOHlLtJ_T0087860	-	560	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0087850	-	4443	XM_006507570	MGP_NZOHlLtJ_P0087850	392 (aa)	XP_006507633	P70318
MGP_NZOHlLtJ_T0087851	-	4258	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0087852	-	2835	-	MGP_NZOHlLtJ_P0087852	336 (aa)	-	-
MGP_NZOHlLtJ_T0087853	-	2033	-	MGP_NZOHlLtJ_P0087853	375 (aa)	-	-
MGP_NZOHlLtJ_T0087854	-	953	-	MGP_NZOHlLtJ_P0087854	106 (aa)	-	-
MGP_NZOHlLtJ_T0087855	-	562	-	MGP_NZOHlLtJ_P0087855	107 (aa)	-	-
MGP_NZOHlLtJ_T0087856	-	2319	-	MGP_NZOHlLtJ_P0087856	135 (aa)	-	-
MGP_NZOHlLtJ_T0087857	-	1580	-	MGP_NZOHlLtJ_P0087857	375 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0033595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0033595's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0033595	Tial1	62	32.184	MGP_NZOHlLtJ_G0023153	Ncbp2	71	33.333
MGP_NZOHlLtJ_G0033595	Tial1	73	33.019	MGP_NZOHlLtJ_G0029330	Trnau1ap	60	32.386
MGP_NZOHlLtJ_G0033595	Tial1	64	31.461	MGP_NZOHlLtJ_G0036263	Rbmx	90	32.258
MGP_NZOHlLtJ_G0033595	Tial1	100	87.440	MGP_NZOHlLtJ_G0031438	Tia1	97	86.992
MGP_NZOHlLtJ_G0033595	Tial1	67	40.244	MGP_NZOHlLtJ_G0017921	Cirbp	85	40.244
MGP_NZOHlLtJ_G0033595	Tial1	73	32.000	MGP_NZOHlLtJ_G0027806	Rbm46	52	30.000
MGP_NZOHlLtJ_G0033595	Tial1	73	37.179	MGP_NZOHlLtJ_G0034984	Elavl3	90	37.179
MGP_NZOHlLtJ_G0033595	Tial1	53	32.143	MGP_NZOHlLtJ_G0035416	Celf6	54	31.818
MGP_NZOHlLtJ_G0033595	Tial1	72	34.615	MGP_NZOHlLtJ_G0028903	Elavl2	93	34.615
MGP_NZOHlLtJ_G0033595	Tial1	99	31.618	MGP_NZOHlLtJ_G0027667	Pabpc4l	94	33.333
MGP_NZOHlLtJ_G0033595	Tial1	69	31.469	MGP_NZOHlLtJ_G0030440	Msi1	56	41.379
MGP_NZOHlLtJ_G0033595	Tial1	65	31.481	MGP_NZOHlLtJ_G0025805	Celf2	61	34.177
MGP_NZOHlLtJ_G0033595	Tial1	67	30.769	MGP_NZOHlLtJ_G0033843	Elavl1	95	30.769
MGP_NZOHlLtJ_G0033595	Tial1	94	31.783	MGP_NZOHlLtJ_G0023576	Pabpc6	56	34.014
MGP_NZOHlLtJ_G0033595	Tial1	94	31.008	MGP_NZOHlLtJ_G0022226	Pabpc1	56	34.783
MGP_NZOHlLtJ_G0033595	Tial1	84	30.088	MGP_NZOHlLtJ_G0025133	Rbm4b	92	30.345
MGP_NZOHlLtJ_G0033595	Tial1	94	30.233	MGP_NZOHlLtJ_G0029200	Pabpc4	93	35.366
MGP_NZOHlLtJ_G0033595	Tial1	92	32.500	MGP_NZOHlLtJ_G0024827	Pabpc2	50	35.036
MGP_NZOHlLtJ_G0033595	Tial1	81	31.111	MGP_NZOHlLtJ_G0019901	Rbfox3	53	31.868
MGP_NZOHlLtJ_G0033595	Tial1	91	32.099	MGP_NZOHlLtJ_G0028534	-	72	31.250
MGP_NZOHlLtJ_G0033595	Tial1	73	35.897	MGP_NZOHlLtJ_G0029034	Elavl4	88	35.897
MGP_NZOHlLtJ_G0033595	Tial1	81	37.333	MGP_NZOHlLtJ_G0028026	Celf3	70	34.091