EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0034213 (Gene tree)
Gene ID: -
Gene Symbol: Ddx49
Alias: R27090_2
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 9828 bases
Position: chr8:69799164-69808991
Accession: 2136689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0090014	ResIII	PF04851.15	4.2e-06	1	1
MGP_NZOHlLtJ_P0090014	DEAD	PF00270.29	7.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0090018	-	1447	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0090019	-	305	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0090014	-	2137	-	MGP_NZOHlLtJ_P0090014	480 (aa)	-	Q4FZF3
MGP_NZOHlLtJ_T0090015	-	2163	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0090016	-	599	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0090017	-	1101	-	MGP_NZOHlLtJ_P0090017	354 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0034213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0034213's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0034213	Ddx49	90	37.500	MGP_NZOHlLtJ_G0017358	D1Pas1	55	36.316
MGP_NZOHlLtJ_G0034213	Ddx49	97	35.211	MGP_NZOHlLtJ_G0019742	Ddx5	76	34.062
MGP_NZOHlLtJ_G0034213	Ddx49	91	39.521	MGP_NZOHlLtJ_G0022501	Ddx17	56	37.903
MGP_NZOHlLtJ_G0034213	Ddx49	59	33.175	MGP_NZOHlLtJ_G0018451	Ddx56	94	32.627
MGP_NZOHlLtJ_G0034213	Ddx49	97	49.271	MGP_NZOHlLtJ_G0031887	Ddx47	95	45.824
MGP_NZOHlLtJ_G0034213	Ddx49	94	32.440	MGP_NZOHlLtJ_G0018979	Eif4a1	74	33.884
MGP_NZOHlLtJ_G0034213	Ddx49	97	33.333	MGP_NZOHlLtJ_G0034352	Ddx39	87	33.156
MGP_NZOHlLtJ_G0034213	Ddx49	95	33.138	MGP_NZOHlLtJ_G0016981	Ddx59	58	32.609
MGP_NZOHlLtJ_G0034213	Ddx49	94	32.239	MGP_NZOHlLtJ_G0023106	-	92	32.546
MGP_NZOHlLtJ_G0034213	Ddx49	92	38.066	MGP_NZOHlLtJ_G0016852	Ddx18	56	36.148
MGP_NZOHlLtJ_G0034213	Ddx49	98	32.741	MGP_NZOHlLtJ_G0026009	Ddx31	63	31.136
MGP_NZOHlLtJ_G0034213	Ddx49	97	38.177	MGP_NZOHlLtJ_G0027386	Ddx27	59	33.696
MGP_NZOHlLtJ_G0034213	Ddx49	97	33.046	MGP_NZOHlLtJ_G0024083	Ddx39b	86	32.891
MGP_NZOHlLtJ_G0034213	Ddx49	76	30.081	MGP_NZOHlLtJ_G0019295	Ddx52	61	30.081
MGP_NZOHlLtJ_G0034213	Ddx49	92	33.238	MGP_NZOHlLtJ_G0030570	Ddx55	56	33.056
MGP_NZOHlLtJ_G0034213	Ddx49	92	32.402	MGP_NZOHlLtJ_G0034586	Ddx28	68	31.649
MGP_NZOHlLtJ_G0034213	Ddx49	93	30.175	MGP_NZOHlLtJ_G0030361	Ddx51	71	30.573
MGP_NZOHlLtJ_G0034213	Ddx49	96	33.333	MGP_NZOHlLtJ_G0021029	Ddx41	62	32.921
MGP_NZOHlLtJ_G0034213	Ddx49	93	34.897	MGP_NZOHlLtJ_G0035581	Ddx43	60	34.913
MGP_NZOHlLtJ_G0034213	Ddx49	95	31.953	MGP_NZOHlLtJ_G0019909	Eif4a3	91	32.190
MGP_NZOHlLtJ_G0034213	Ddx49	95	34.454	MGP_NZOHlLtJ_G0021360	Ddx4	52	34.474
MGP_NZOHlLtJ_G0034213	Ddx49	90	36.919	MGP_NZOHlLtJ_G0036083	Ddx3x	55	35.789
MGP_NZOHlLtJ_G0034213	Ddx49	96	40.909	MGP_NZOHlLtJ_G0020035	Ddx1	63	40.909