EuRBPDB

Description

Ensembl ID: MGP_NZOHlLtJ_G0034969 (Gene tree)
Gene ID: -
Gene Symbol: Smarca4
Alias: Baf190a|Brg1|HP1-BP72|SNF2beta|SW1/SNF|Snf2b|Snf2l4|b2b508.1Clo|b2b692Clo
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 89254 bases
Position: chr9:18821734-18910987
Accession: 88192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0092298	ResIII	PF04851.15	2.2e-09	1	1
MGP_NZOHlLtJ_P0092297	ResIII	PF04851.15	3.1e-09	1	1
MGP_NZOHlLtJ_P0092295	ResIII	PF04851.15	3.1e-09	1	1
MGP_NZOHlLtJ_P0092296	ResIII	PF04851.15	3.1e-09	1	1
MGP_NZOHlLtJ_P0092298	BRK	PF07533.16	1.8e-17	1	1
MGP_NZOHlLtJ_P0092297	BRK	PF07533.16	2.5e-17	1	1
MGP_NZOHlLtJ_P0092295	BRK	PF07533.16	2.5e-17	1	1
MGP_NZOHlLtJ_P0092296	BRK	PF07533.16	2.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0092298	-	3800	-	MGP_NZOHlLtJ_P0092298	1266 (aa)	-	-
MGP_NZOHlLtJ_T0092295	-	6367	XM_006510117	MGP_NZOHlLtJ_P0092295	1614 (aa)	XP_006510180	Q3TKT4
MGP_NZOHlLtJ_T0092296	-	6354	-	MGP_NZOHlLtJ_P0092296	1614 (aa)	-	-
MGP_NZOHlLtJ_T0092297	-	5405	-	MGP_NZOHlLtJ_P0092297	1613 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0034969	Smarca4	92	79.726	MGP_NZOHlLtJ_G0025477	Smarca2	96	73.829