EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0034991 (Gene tree)
Gene ID: -
Gene Symbol: Zfp872
Alias: 9530015I07Rik
Full Name: zinc finger protein 872
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 10912 bases
Position: chr9:19438670-19449581
Accession: 3588272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0092341	zf-C2H2	PF00096.26	6.2e-50	1	9
MGP_NZOHlLtJ_P0092341	zf-C2H2	PF00096.26	6.2e-50	2	9
MGP_NZOHlLtJ_P0092341	zf-C2H2	PF00096.26	6.2e-50	3	9
MGP_NZOHlLtJ_P0092341	zf-C2H2	PF00096.26	6.2e-50	4	9
MGP_NZOHlLtJ_P0092341	zf-C2H2	PF00096.26	6.2e-50	5	9
MGP_NZOHlLtJ_P0092341	zf-C2H2	PF00096.26	6.2e-50	6	9
MGP_NZOHlLtJ_P0092341	zf-C2H2	PF00096.26	6.2e-50	7	9
MGP_NZOHlLtJ_P0092341	zf-C2H2	PF00096.26	6.2e-50	8	9
MGP_NZOHlLtJ_P0092341	zf-C2H2	PF00096.26	6.2e-50	9	9
MGP_NZOHlLtJ_P0092340	zf-C2H2	PF00096.26	6.4e-50	1	9
MGP_NZOHlLtJ_P0092340	zf-C2H2	PF00096.26	6.4e-50	2	9
MGP_NZOHlLtJ_P0092340	zf-C2H2	PF00096.26	6.4e-50	3	9
MGP_NZOHlLtJ_P0092340	zf-C2H2	PF00096.26	6.4e-50	4	9
MGP_NZOHlLtJ_P0092340	zf-C2H2	PF00096.26	6.4e-50	5	9
MGP_NZOHlLtJ_P0092340	zf-C2H2	PF00096.26	6.4e-50	6	9
MGP_NZOHlLtJ_P0092340	zf-C2H2	PF00096.26	6.4e-50	7	9
MGP_NZOHlLtJ_P0092340	zf-C2H2	PF00096.26	6.4e-50	8	9
MGP_NZOHlLtJ_P0092340	zf-C2H2	PF00096.26	6.4e-50	9	9
MGP_NZOHlLtJ_P0092341	zf-met	PF12874.7	9e-05	1	1
MGP_NZOHlLtJ_P0092340	zf-met	PF12874.7	9.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0092340	-	2958	-	MGP_NZOHlLtJ_P0092340	465 (aa)	-	F7APL9
MGP_NZOHlLtJ_T0092341	-	1395	-	MGP_NZOHlLtJ_P0092341	464 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0034991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0034991's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0034991	Zfp872	97	48.780	MGP_NZOHlLtJ_G0032591	-	64	48.343
MGP_NZOHlLtJ_G0034991	Zfp872	99	47.815	MGP_NZOHlLtJ_G0018696	Zfp354a	95	50.282
MGP_NZOHlLtJ_G0034991	Zfp872	81	47.191	MGP_NZOHlLtJ_G0032041	Zfp628	60	46.114
MGP_NZOHlLtJ_G0034991	Zfp872	84	44.156	MGP_NZOHlLtJ_G0032049	Zfp865	78	35.776
MGP_NZOHlLtJ_G0034991	Zfp872	87	45.701	MGP_NZOHlLtJ_G0020694	Zkscan4	59	45.701
MGP_NZOHlLtJ_G0034991	Zfp872	99	53.118	MGP_NZOHlLtJ_G0018832	Zfp867	95	53.187
MGP_NZOHlLtJ_G0034991	Zfp872	86	53.608	MGP_NZOHlLtJ_G0032468	Zfp420	99	54.233
MGP_NZOHlLtJ_G0034991	Zfp872	84	46.226	MGP_NZOHlLtJ_G0032333	Zfp574	93	46.226
MGP_NZOHlLtJ_G0034991	Zfp872	99	45.814	MGP_NZOHlLtJ_G0018688	Zfp454	98	45.814
MGP_NZOHlLtJ_G0034991	Zfp872	86	47.619	MGP_NZOHlLtJ_G0032405	Zfp974	89	48.905
MGP_NZOHlLtJ_G0034991	Zfp872	93	34.726	MGP_NZOHlLtJ_G0018784	Zfp672	100	40.000
MGP_NZOHlLtJ_G0034991	Zfp872	99	48.746	MGP_NZOHlLtJ_G0026939	Zfp661	94	48.507
MGP_NZOHlLtJ_G0034991	Zfp872	99	50.284	MGP_NZOHlLtJ_G0034279	Zfp882	97	44.991
MGP_NZOHlLtJ_G0034991	Zfp872	99	43.333	MGP_NZOHlLtJ_G0023698	Zfp945	95	44.904
MGP_NZOHlLtJ_G0034991	Zfp872	96	33.159	MGP_NZOHlLtJ_G0031165	Repin1	98	33.159
MGP_NZOHlLtJ_G0034991	Zfp872	83	41.964	MGP_NZOHlLtJ_G0029511	Zbtb17	56	42.638
MGP_NZOHlLtJ_G0034991	Zfp872	95	51.163	MGP_NZOHlLtJ_G0032301	Zfp108	70	49.333
MGP_NZOHlLtJ_G0034991	Zfp872	99	41.176	MGP_NZOHlLtJ_G0033547	-	82	40.530
MGP_NZOHlLtJ_G0034991	Zfp872	84	48.162	MGP_NZOHlLtJ_G0033545	Zfp768	51	47.426
MGP_NZOHlLtJ_G0034991	Zfp872	99	40.755	MGP_NZOHlLtJ_G0033548	E430018J23Rik	86	41.045
MGP_NZOHlLtJ_G0034991	Zfp872	99	45.773	MGP_NZOHlLtJ_G0023675	Zfp677	98	45.773
MGP_NZOHlLtJ_G0034991	Zfp872	99	43.702	MGP_NZOHlLtJ_G0023677	Zfp51	94	44.444
MGP_NZOHlLtJ_G0034991	Zfp872	97	39.935	MGP_NZOHlLtJ_G0023705	Zscan10	80	39.935
MGP_NZOHlLtJ_G0034991	Zfp872	79	38.605	MGP_NZOHlLtJ_G0019420	Zfp652	69	36.054
MGP_NZOHlLtJ_G0034991	Zfp872	99	41.411	MGP_NZOHlLtJ_G0023687	Zfp947	97	41.411
MGP_NZOHlLtJ_G0034991	Zfp872	99	42.278	MGP_NZOHlLtJ_G0023686	Zfp820	94	42.239
MGP_NZOHlLtJ_G0034991	Zfp872	82	34.140	MGP_NZOHlLtJ_G0034497	Zfp319	90	34.722
MGP_NZOHlLtJ_G0034991	Zfp872	94	58.140	MGP_NZOHlLtJ_G0032302	Zfp61	63	58.140
MGP_NZOHlLtJ_G0034991	Zfp872	94	40.800	MGP_NZOHlLtJ_G0025063	Zfp236	62	44.318
MGP_NZOHlLtJ_G0034991	Zfp872	96	53.982	MGP_NZOHlLtJ_G0031645	Zfp637	88	53.982
MGP_NZOHlLtJ_G0034991	Zfp872	100	50.368	MGP_NZOHlLtJ_G0021128	Rslcan18	80	47.959
MGP_NZOHlLtJ_G0034991	Zfp872	99	48.447	MGP_NZOHlLtJ_G0021129	Zfp759	99	46.000
MGP_NZOHlLtJ_G0034991	Zfp872	95	51.220	MGP_NZOHlLtJ_G0032611	Zfp715	75	51.220
MGP_NZOHlLtJ_G0034991	Zfp872	80	44.330	MGP_NZOHlLtJ_G0029971	Zbtb49	78	44.444
MGP_NZOHlLtJ_G0034991	Zfp872	88	51.672	MGP_NZOHlLtJ_G0032296	Zfp112	69	52.038
MGP_NZOHlLtJ_G0034991	Zfp872	80	34.050	MGP_NZOHlLtJ_G0027410	Zfp64	71	34.082
MGP_NZOHlLtJ_G0034991	Zfp872	99	39.823	MGP_NZOHlLtJ_G0027372	Zfp334	99	41.827
MGP_NZOHlLtJ_G0034991	Zfp872	95	45.552	MGP_NZOHlLtJ_G0032303	Zfp94	96	45.552
MGP_NZOHlLtJ_G0034991	Zfp872	99	40.530	MGP_NZOHlLtJ_G0031296	Prdm5	82	40.076
MGP_NZOHlLtJ_G0034991	Zfp872	99	47.684	MGP_NZOHlLtJ_G0021145	Zfp748	99	48.459
MGP_NZOHlLtJ_G0034991	Zfp872	93	47.880	MGP_NZOHlLtJ_G0032299	Zfp111	81	47.880
MGP_NZOHlLtJ_G0034991	Zfp872	99	53.571	MGP_NZOHlLtJ_G0022440	Zfp251	68	54.027
MGP_NZOHlLtJ_G0034991	Zfp872	99	45.113	MGP_NZOHlLtJ_G0034655	Zfp1	98	45.113