EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0035416 (Gene tree)
Gene ID: -
Gene Symbol: Celf6
Alias: 6330569O16Rik|Brunol6
Full Name: CUGBP%2C Elav-like family member 6
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 32526 bases
Position: chr9:58369737-58402262
Accession: 1923433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0093496	RRM_1	PF00076.22	2.1e-51	1	3
MGP_NZOHlLtJ_P0093496	RRM_1	PF00076.22	2.1e-51	2	3
MGP_NZOHlLtJ_P0093496	RRM_1	PF00076.22	2.1e-51	3	3
MGP_NZOHlLtJ_P0093494	RRM_1	PF00076.22	2.6e-51	1	3
MGP_NZOHlLtJ_P0093494	RRM_1	PF00076.22	2.6e-51	2	3
MGP_NZOHlLtJ_P0093494	RRM_1	PF00076.22	2.6e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0093493	-	3057	XM_006511540	MGP_NZOHlLtJ_P0093493	182 (aa)	XP_006511603	Q7TN33
MGP_NZOHlLtJ_T0093495	-	2894	-	MGP_NZOHlLtJ_P0093495	162 (aa)	-	-
MGP_NZOHlLtJ_T0093494	-	2943	-	MGP_NZOHlLtJ_P0093494	481 (aa)	-	-
MGP_NZOHlLtJ_T0093497	-	449	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0093496	-	4571	-	MGP_NZOHlLtJ_P0093496	460 (aa)	-	-
MGP_NZOHlLtJ_T0093498	-	591	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0035416's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0035416's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0035416	Celf6	68	37.113	MGP_NZOHlLtJ_G0029200	Pabpc4	93	35.211
MGP_NZOHlLtJ_G0035416	Celf6	62	37.113	MGP_NZOHlLtJ_G0028534	-	61	37.113
MGP_NZOHlLtJ_G0035416	Celf6	95	35.802	MGP_NZOHlLtJ_G0029034	Elavl4	85	40.741
MGP_NZOHlLtJ_G0035416	Celf6	89	37.037	MGP_NZOHlLtJ_G0028903	Elavl2	78	40.741
MGP_NZOHlLtJ_G0035416	Celf6	57	44.444	MGP_NZOHlLtJ_G0033843	Elavl1	97	44.444
MGP_NZOHlLtJ_G0035416	Celf6	66	32.500	MGP_NZOHlLtJ_G0018702	Hnrnpab	65	31.414
MGP_NZOHlLtJ_G0035416	Celf6	57	42.308	MGP_NZOHlLtJ_G0034984	Elavl3	80	41.975
MGP_NZOHlLtJ_G0035416	Celf6	100	67.200	MGP_NZOHlLtJ_G0024664	Celf4	99	67.066
MGP_NZOHlLtJ_G0035416	Celf6	54	31.818	MGP_NZOHlLtJ_G0033595	Tial1	53	32.143
MGP_NZOHlLtJ_G0035416	Celf6	62	32.955	MGP_NZOHlLtJ_G0031438	Tia1	85	36.000
MGP_NZOHlLtJ_G0035416	Celf6	79	31.250	MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	66	32.143
MGP_NZOHlLtJ_G0035416	Celf6	75	85.526	MGP_NZOHlLtJ_G0028026	Celf3	81	87.368
MGP_NZOHlLtJ_G0035416	Celf6	77	39.062	MGP_NZOHlLtJ_G0023576	Pabpc6	64	39.062
MGP_NZOHlLtJ_G0035416	Celf6	52	42.105	MGP_NZOHlLtJ_G0035919	Rbms3	82	42.105
MGP_NZOHlLtJ_G0035416	Celf6	91	45.549	MGP_NZOHlLtJ_G0026612	Celf1	98	45.135
MGP_NZOHlLtJ_G0035416	Celf6	75	84.783	MGP_NZOHlLtJ_G0017995	Celf5	93	80.645
MGP_NZOHlLtJ_G0035416	Celf6	91	45.567	MGP_NZOHlLtJ_G0025805	Celf2	79	80.952
MGP_NZOHlLtJ_G0035416	Celf6	54	35.802	MGP_NZOHlLtJ_G0018283	Rbms2	50	35.802
MGP_NZOHlLtJ_G0035416	Celf6	51	34.483	MGP_NZOHlLtJ_G0036568	Pabpc5	63	34.483