EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0035457 (Gene tree)
Gene ID: -
Gene Symbol: Rab11a
Alias: Rab11|Rab11A
Full Name: RAB11A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 26363 bases
Position: chr9:63800785-63827147
Accession: 1858202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0093673	MMR_HSR1	PF01926.23	2.3e-07	1	1
MGP_NZOHlLtJ_P0093674	MMR_HSR1	PF01926.23	2.5e-07	1	1
MGP_NZOHlLtJ_P0093668	MMR_HSR1	PF01926.23	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0093668	-	6112	-	MGP_NZOHlLtJ_P0093668	216 (aa)	-	P62492
MGP_NZOHlLtJ_T0093669	-	726	-	MGP_NZOHlLtJ_P0093669	86 (aa)	-	-
MGP_NZOHlLtJ_T0093675	-	695	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0093674	-	595	-	MGP_NZOHlLtJ_P0093674	155 (aa)	-	-
MGP_NZOHlLtJ_T0093671	-	500	-	MGP_NZOHlLtJ_P0093671	86 (aa)	-	-
MGP_NZOHlLtJ_T0093670	-	603	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0093673	-	462	-	MGP_NZOHlLtJ_P0093673	153 (aa)	-	-
MGP_NZOHlLtJ_T0093672	-	397	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0035457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0035457's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0035457	Rab11a	90	40.426	MGP_NZOHlLtJ_G0036210	Rab33a	74	39.665
MGP_NZOHlLtJ_G0035457	Rab11a	68	30.065	MGP_NZOHlLtJ_G0016957	Arl8a	77	30.065
MGP_NZOHlLtJ_G0035457	Rab11a	89	43.885	MGP_NZOHlLtJ_G0019802	Rab37	77	45.181
MGP_NZOHlLtJ_G0035457	Rab11a	91	56.115	MGP_NZOHlLtJ_G0021721	Rab2b	95	51.366
MGP_NZOHlLtJ_G0035457	Rab11a	90	49.635	MGP_NZOHlLtJ_G0030446	Rab35	99	42.512
MGP_NZOHlLtJ_G0035457	Rab11a	87	38.686	MGP_NZOHlLtJ_G0031468	Rab7	93	42.857
MGP_NZOHlLtJ_G0035457	Rab11a	89	42.143	MGP_NZOHlLtJ_G0036637	Rab9b	86	41.040
MGP_NZOHlLtJ_G0035457	Rab11a	93	48.252	MGP_NZOHlLtJ_G0024584	Rab18	78	47.531
MGP_NZOHlLtJ_G0035457	Rab11a	74	30.303	MGP_NZOHlLtJ_G0019993	Dnajc27	60	30.303
MGP_NZOHlLtJ_G0035457	Rab11a	94	35.780	MGP_NZOHlLtJ_G0017784	Rab36	79	35.780
MGP_NZOHlLtJ_G0035457	Rab11a	93	42.254	MGP_NZOHlLtJ_G0024428	Rab31	86	41.071
MGP_NZOHlLtJ_G0035457	Rab11a	95	70.748	MGP_NZOHlLtJ_G0027878	Rab25	99	62.150
MGP_NZOHlLtJ_G0035457	Rab11a	88	48.148	MGP_NZOHlLtJ_G0024338	Rab5a	91	41.951
MGP_NZOHlLtJ_G0035457	Rab11a	88	31.293	MGP_NZOHlLtJ_G0030847	Rasl11a	60	31.293
MGP_NZOHlLtJ_G0035457	Rab11a	93	41.379	MGP_NZOHlLtJ_G0027675	Rab33b	85	37.799
MGP_NZOHlLtJ_G0035457	Rab11a	88	35.821	MGP_NZOHlLtJ_G0035708	Rab6b	77	35.404
MGP_NZOHlLtJ_G0035457	Rab11a	100	94.771	MGP_NZOHlLtJ_G0023982	Rab11b	100	89.450
MGP_NZOHlLtJ_G0035457	Rab11a	90	43.796	MGP_NZOHlLtJ_G0024437	Rab12	70	37.799
MGP_NZOHlLtJ_G0035457	Rab11a	100	50.000	MGP_NZOHlLtJ_G0018498	Rab1a	85	52.299
MGP_NZOHlLtJ_G0035457	Rab11a	91	56.835	MGP_NZOHlLtJ_G0028511	Rab2a	81	54.971
MGP_NZOHlLtJ_G0035457	Rab11a	81	34.921	MGP_NZOHlLtJ_G0033728	Hras	85	37.654
MGP_NZOHlLtJ_G0035457	Rab11a	94	39.423	MGP_NZOHlLtJ_G0036792	Rab9	97	39.423
MGP_NZOHlLtJ_G0035457	Rab11a	92	34.752	MGP_NZOHlLtJ_G0016340	Rab23	80	32.984
MGP_NZOHlLtJ_G0035457	Rab11a	76	31.667	MGP_NZOHlLtJ_G0019639	Arl4d	58	31.667
MGP_NZOHlLtJ_G0035457	Rab11a	91	46.763	MGP_NZOHlLtJ_G0020291	Rab15	93	40.887
MGP_NZOHlLtJ_G0035457	Rab11a	88	49.630	MGP_NZOHlLtJ_G0019596	Rab5c	90	41.262
MGP_NZOHlLtJ_G0035457	Rab11a	91	44.604	MGP_NZOHlLtJ_G0033019	Rab30	97	37.981
MGP_NZOHlLtJ_G0035457	Rab11a	79	39.669	MGP_NZOHlLtJ_G0032059	Rasl2-9	70	36.364
MGP_NZOHlLtJ_G0035457	Rab11a	75	40.000	MGP_NZOHlLtJ_G0022666	Rabl2	67	37.908
MGP_NZOHlLtJ_G0035457	Rab11a	84	38.281	MGP_NZOHlLtJ_G0033079	Rab6a	84	35.955
MGP_NZOHlLtJ_G0035457	Rab11a	97	52.201	MGP_NZOHlLtJ_G0025154	Rab1b	84	55.357
MGP_NZOHlLtJ_G0035457	Rab11a	81	34.921	MGP_NZOHlLtJ_G0028159	Nras	95	37.931
MGP_NZOHlLtJ_G0035457	Rab11a	86	34.586	MGP_NZOHlLtJ_G0029820	Rheb	89	32.927
MGP_NZOHlLtJ_G0035457	Rab11a	81	34.127	MGP_NZOHlLtJ_G0031955	Kras	87	37.725
MGP_NZOHlLtJ_G0035457	Rab11a	88	49.265	MGP_NZOHlLtJ_G0036387	Rab39b	82	46.857
MGP_NZOHlLtJ_G0035457	Rab11a	78	31.746	MGP_NZOHlLtJ_G0020130	Arl4a	60	31.746
MGP_NZOHlLtJ_G0035457	Rab11a	81	31.746	MGP_NZOHlLtJ_G0035685	Mras	85	32.768
MGP_NZOHlLtJ_G0035457	Rab11a	90	43.066	MGP_NZOHlLtJ_G0027439	Rab22a	81	42.038