EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0035644 (Gene tree)
Gene ID: -
Gene Symbol: Plod2
Alias: D530025C14Rik|LH2|Plod-2|lysyl hydroxylase 2
Full Name: procollagen lysine%2C 2-oxoglutarate 5-dioxygenase 2
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 67163 bases
Position: chr9:92723535-92790697
Accession: 1347007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0094483	2OG-FeII_Oxy	PF03171.20	1.3e-05	1	1
MGP_NZOHlLtJ_P0094484	2OG-FeII_Oxy	PF03171.20	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0094483	-	3657	-	MGP_NZOHlLtJ_P0094483	737 (aa)	-	Q9R0B9
MGP_NZOHlLtJ_T0094487	-	1276	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0094486	-	596	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0094485	-	844	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0094484	-	3671	-	MGP_NZOHlLtJ_P0094484	758 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0035644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0035644's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0035644	Plod2	95	60.171	MGP_NZOHlLtJ_G0029572	Plod1	99	58.904
MGP_NZOHlLtJ_G0035644	Plod2	95	59.687	MGP_NZOHlLtJ_G0030684	Plod3	100	57.760