EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0035919 (Gene tree)
Gene ID: -
Gene Symbol: Rbms3
Alias: 6720477E09Rik|8430436O14Rik
Full Name: RNA binding motif%2C single stranded interacting protein
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 1103664 bases
Position: chr9:118075768-119179431
Accession: 2444477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0095976	RRM_1	PF00076.22	1.6e-32	1	2
MGP_NZOHlLtJ_P0095976	RRM_1	PF00076.22	1.6e-32	2	2
MGP_NZOHlLtJ_P0095973	RRM_1	PF00076.22	1.2e-31	1	2
MGP_NZOHlLtJ_P0095973	RRM_1	PF00076.22	1.2e-31	2	2
MGP_NZOHlLtJ_P0095971	RRM_1	PF00076.22	1.4e-31	1	2
MGP_NZOHlLtJ_P0095971	RRM_1	PF00076.22	1.4e-31	2	2
MGP_NZOHlLtJ_P0095968	RRM_1	PF00076.22	1.5e-31	1	2
MGP_NZOHlLtJ_P0095968	RRM_1	PF00076.22	1.5e-31	2	2
MGP_NZOHlLtJ_P0095972	RRM_1	PF00076.22	1.5e-31	1	2
MGP_NZOHlLtJ_P0095972	RRM_1	PF00076.22	1.5e-31	2	2
MGP_NZOHlLtJ_P0095967	RRM_1	PF00076.22	1.7e-31	1	2
MGP_NZOHlLtJ_P0095967	RRM_1	PF00076.22	1.7e-31	2	2
MGP_NZOHlLtJ_P0095970	RRM_1	PF00076.22	2e-31	1	2
MGP_NZOHlLtJ_P0095970	RRM_1	PF00076.22	2e-31	2	2
MGP_NZOHlLtJ_P0095974	RRM_1	PF00076.22	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0095977	-	1438	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0095976	-	619	-	MGP_NZOHlLtJ_P0095976	206 (aa)	-	-
MGP_NZOHlLtJ_T0095978	-	1753	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0095967	-	7904	XM_017313248	MGP_NZOHlLtJ_P0095967	431 (aa)	XP_017168737	Q8BWL5
MGP_NZOHlLtJ_T0095974	-	585	-	MGP_NZOHlLtJ_P0095974	194 (aa)	-	-
MGP_NZOHlLtJ_T0095975	-	2027	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0095969	-	1626	-	MGP_NZOHlLtJ_P0095969	185 (aa)	-	-
MGP_NZOHlLtJ_T0095968	-	3315	-	MGP_NZOHlLtJ_P0095968	414 (aa)	-	-
MGP_NZOHlLtJ_T0095970	-	2128	-	MGP_NZOHlLtJ_P0095970	463 (aa)	-	-
MGP_NZOHlLtJ_T0095971	-	2166	-	MGP_NZOHlLtJ_P0095971	402 (aa)	-	-
MGP_NZOHlLtJ_T0095972	-	2236	-	MGP_NZOHlLtJ_P0095972	415 (aa)	-	-
MGP_NZOHlLtJ_T0095973	-	1984	-	MGP_NZOHlLtJ_P0095973	386 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0035919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0035919's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0035919	Rbms3	82	42.105	MGP_NZOHlLtJ_G0035416	Celf6	52	42.105
MGP_NZOHlLtJ_G0035919	Rbms3	83	80.663	MGP_NZOHlLtJ_G0018283	Rbms2	86	66.758
MGP_NZOHlLtJ_G0035919	Rbms3	72	40.789	MGP_NZOHlLtJ_G0024664	Celf4	68	40.789
MGP_NZOHlLtJ_G0035919	Rbms3	68	43.421	MGP_NZOHlLtJ_G0026612	Celf1	53	43.421
MGP_NZOHlLtJ_G0035919	Rbms3	77	30.818	MGP_NZOHlLtJ_G0027313	Pabpc1l	59	30.818
MGP_NZOHlLtJ_G0035919	Rbms3	77	33.708	MGP_NZOHlLtJ_G0023576	Pabpc6	59	34.091
MGP_NZOHlLtJ_G0035919	Rbms3	70	38.562	MGP_NZOHlLtJ_G0034984	Elavl3	63	37.931
MGP_NZOHlLtJ_G0035919	Rbms3	97	34.356	MGP_NZOHlLtJ_G0033843	Elavl1	91	34.356
MGP_NZOHlLtJ_G0035919	Rbms3	75	37.079	MGP_NZOHlLtJ_G0025805	Celf2	77	39.474
MGP_NZOHlLtJ_G0035919	Rbms3	93	36.134	MGP_NZOHlLtJ_G0017995	Celf5	57	42.105
MGP_NZOHlLtJ_G0035919	Rbms3	76	39.474	MGP_NZOHlLtJ_G0028026	Celf3	91	39.474
MGP_NZOHlLtJ_G0035919	Rbms3	83	37.097	MGP_NZOHlLtJ_G0029034	Elavl4	70	36.458
MGP_NZOHlLtJ_G0035919	Rbms3	99	80.841	MGP_NZOHlLtJ_G0026239	Rbms1	96	71.538
MGP_NZOHlLtJ_G0035919	Rbms3	83	37.222	MGP_NZOHlLtJ_G0028903	Elavl2	69	37.209