EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0036057 (Gene tree)
Gene ID: -
Gene Symbol: Rbm3
Alias: 2600016C11Rik
Full Name: RNA binding motif protein 3
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 7579 bases
Position: chrX:2766790-2774368
Accession: 1099460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0096454	RRM_1	PF00076.22	1.7e-24	1	1
MGP_NZOHlLtJ_P0096453	RRM_1	PF00076.22	1.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0096452	-	2296	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0096453	-	2792	-	MGP_NZOHlLtJ_P0096453	154 (aa)	-	-
MGP_NZOHlLtJ_T0096456	-	1208	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0096457	-	721	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0096454	-	969	-	MGP_NZOHlLtJ_P0096454	153 (aa)	-	-
MGP_NZOHlLtJ_T0096455	-	1055	-	MGP_NZOHlLtJ_P0096455	90 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0036057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0036057's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0036057	Rbm3	79	32.394	MGP_NZOHlLtJ_G0023903	Srsf3	57	34.211
MGP_NZOHlLtJ_G0036057	Rbm3	90	39.326	MGP_NZOHlLtJ_G0017927	Dazap1	78	46.032
MGP_NZOHlLtJ_G0036057	Rbm3	78	55.714	MGP_NZOHlLtJ_G0036263	Rbmx	79	56.790
MGP_NZOHlLtJ_G0036057	Rbm3	73	33.333	MGP_NZOHlLtJ_G0030567	Snrnp35	55	34.848
MGP_NZOHlLtJ_G0036057	Rbm3	100	62.941	MGP_NZOHlLtJ_G0017921	Cirbp	99	60.000
MGP_NZOHlLtJ_G0036057	Rbm3	82	43.243	MGP_NZOHlLtJ_G0019357	Msi2	61	42.857
MGP_NZOHlLtJ_G0036057	Rbm3	90	35.385	MGP_NZOHlLtJ_G0027667	Pabpc4l	83	34.286
MGP_NZOHlLtJ_G0036057	Rbm3	92	36.000	MGP_NZOHlLtJ_G0029200	Pabpc4	86	37.500
MGP_NZOHlLtJ_G0036057	Rbm3	67	44.000	MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	91	31.034
MGP_NZOHlLtJ_G0036057	Rbm3	82	38.710	MGP_NZOHlLtJ_G0029034	Elavl4	58	31.646
MGP_NZOHlLtJ_G0036057	Rbm3	80	36.709	MGP_NZOHlLtJ_G0030244	Hnrnpd	70	34.667
MGP_NZOHlLtJ_G0036057	Rbm3	82	38.710	MGP_NZOHlLtJ_G0028903	Elavl2	63	32.911
MGP_NZOHlLtJ_G0036057	Rbm3	99	35.955	MGP_NZOHlLtJ_G0031438	Tia1	71	40.260