EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0036201 (Gene tree)
Gene ID: -
Gene Symbol: Ocrl
Alias: 9530014D17Rik|BB143339|OCRL1
Full Name: oculocerebrorenal syndrome of Lowe
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 56606 bases
Position: chrX:42954013-43010618
Accession: 109589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0096878	Exo_endo_phos	PF03372.23	3.3e-15	1	1
MGP_NZOHlLtJ_P0096881	Exo_endo_phos	PF03372.23	4.1e-15	1	1
MGP_NZOHlLtJ_P0096877	Exo_endo_phos	PF03372.23	4.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0096877	-	5253	XM_011251008	MGP_NZOHlLtJ_P0096877	900 (aa)	XP_011249310	Q6NVF0
MGP_NZOHlLtJ_T0096881	-	5512	-	MGP_NZOHlLtJ_P0096881	887 (aa)	-	-
MGP_NZOHlLtJ_T0096880	-	2839	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0096883	-	799	-	MGP_NZOHlLtJ_P0096883	265 (aa)	-	-
MGP_NZOHlLtJ_T0096882	-	727	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0096878	-	3210	-	MGP_NZOHlLtJ_P0096878	727 (aa)	-	-
MGP_NZOHlLtJ_T0096879	-	2930	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0036201's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0036201	Ocrl	82	51.578	MGP_NZOHlLtJ_G0029215	Inpp5b	71	51.748
MGP_NZOHlLtJ_G0036201	Ocrl	50	32.039	MGP_NZOHlLtJ_G0023545	Synj2	58	32.653