EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0015037 (Gene tree)
Gene ID: -
Gene Symbol: Rab23
Alias: AW545388|opb|opb2
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 23193 bases
Position: chr1:30373567-30396759
Accession: 99833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0018208	MMR_HSR1	PF01926.23	1.2e-05	1	1
MGP_PWKPhJ_P0018212	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0018206	-	444	-	-	- (aa)	-	-
MGP_PWKPhJ_T0018207	-	2558	-	-	- (aa)	-	-
MGP_PWKPhJ_T0018208	-	4304	-	MGP_PWKPhJ_P0018208	237 (aa)	-	-
MGP_PWKPhJ_T0018209	-	4380	-	MGP_PWKPhJ_P0018209	64 (aa)	-	-
MGP_PWKPhJ_T0018215	-	1749	-	-	- (aa)	-	-
MGP_PWKPhJ_T0018214	-	437	-	-	- (aa)	-	-
MGP_PWKPhJ_T0018211	-	1086	-	-	- (aa)	-	-
MGP_PWKPhJ_T0018210	-	2049	-	-	- (aa)	-	-
MGP_PWKPhJ_T0018213	-	1951	-	-	- (aa)	-	-
MGP_PWKPhJ_T0018212	-	4200	-	MGP_PWKPhJ_P0018212	237 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0015037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0015037's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0015037	Rab23	85	31.683	MGP_PWKPhJ_G0026295	Rab25	92	31.683
MGP_PWKPhJ_G0015037	Rab23	80	32.984	MGP_PWKPhJ_G0033651	Rab11a	92	34.752
MGP_PWKPhJ_G0015037	Rab23	65	36.538	MGP_PWKPhJ_G0034524	Rab39b	73	36.538
MGP_PWKPhJ_G0015037	Rab23	83	32.487	MGP_PWKPhJ_G0026914	Rab2a	95	31.863
MGP_PWKPhJ_G0015037	Rab23	65	33.766	MGP_PWKPhJ_G0025872	Rab22a	79	33.766
MGP_PWKPhJ_G0015037	Rab23	70	34.337	MGP_PWKPhJ_G0024594	Rab14	88	35.338
MGP_PWKPhJ_G0015037	Rab23	65	36.129	MGP_PWKPhJ_G0028189	Rheb	84	36.129
MGP_PWKPhJ_G0015037	Rab23	67	35.152	MGP_PWKPhJ_G0026098	Rab33b	72	35.152
MGP_PWKPhJ_G0015037	Rab23	66	41.139	MGP_PWKPhJ_G0033895	Rab6b	76	41.139
MGP_PWKPhJ_G0015037	Rab23	80	33.508	MGP_PWKPhJ_G0022511	Rab11b	88	33.508
MGP_PWKPhJ_G0015037	Rab23	70	34.337	MGP_PWKPhJ_G0023645	Rab1b	83	34.337
MGP_PWKPhJ_G0015037	Rab23	86	32.850	MGP_PWKPhJ_G0020303	Rab2b	94	32.850
MGP_PWKPhJ_G0015037	Rab23	74	35.227	MGP_PWKPhJ_G0018235	Rab5c	81	35.227
MGP_PWKPhJ_G0015037	Rab23	72	35.465	MGP_PWKPhJ_G0023083	Rab18	83	35.465
MGP_PWKPhJ_G0015037	Rab23	67	31.765	MGP_PWKPhJ_G0029192	Rasl11a	69	31.765
MGP_PWKPhJ_G0015037	Rab23	65	31.410	MGP_PWKPhJ_G0030278	Kras	94	32.778
MGP_PWKPhJ_G0015037	Rab23	65	34.375	MGP_PWKPhJ_G0034923	Rab9	74	34.375
MGP_PWKPhJ_G0015037	Rab23	66	39.873	MGP_PWKPhJ_G0031319	Rab6a	76	39.873
MGP_PWKPhJ_G0015037	Rab23	67	38.125	MGP_PWKPhJ_G0022839	Rab5a	74	38.125
MGP_PWKPhJ_G0015037	Rab23	70	34.337	MGP_PWKPhJ_G0017160	Rab1a	81	34.337
MGP_PWKPhJ_G0015037	Rab23	74	37.500	MGP_PWKPhJ_G0031259	Rab30	87	37.500
MGP_PWKPhJ_G0015037	Rab23	72	34.682	MGP_PWKPhJ_G0018926	Rab15	81	34.682
MGP_PWKPhJ_G0015037	Rab23	64	38.462	MGP_PWKPhJ_G0017846	Rab34	60	38.462
MGP_PWKPhJ_G0015037	Rab23	75	32.961	MGP_PWKPhJ_G0018439	Rab37	81	32.961
MGP_PWKPhJ_G0015037	Rab23	61	31.507	MGP_PWKPhJ_G0031945	Hras	98	30.332
MGP_PWKPhJ_G0015037	Rab23	68	33.129	MGP_PWKPhJ_G0030381	Rasl2-9	74	33.129
MGP_PWKPhJ_G0015037	Rab23	69	35.119	MGP_PWKPhJ_G0022939	Rab12	68	35.119
MGP_PWKPhJ_G0015037	Rab23	80	30.890	MGP_PWKPhJ_G0022930	Rab31	93	30.890
MGP_PWKPhJ_G0015037	Rab23	65	34.591	MGP_PWKPhJ_G0029808	Rab7	94	43.478
MGP_PWKPhJ_G0015037	Rab23	77	31.383	MGP_PWKPhJ_G0034357	Rab33a	79	31.383
MGP_PWKPhJ_G0015037	Rab23	66	37.654	MGP_PWKPhJ_G0034766	Rab9b	80	37.654
MGP_PWKPhJ_G0015037	Rab23	77	38.172	MGP_PWKPhJ_G0016465	Rab36	69	38.172
MGP_PWKPhJ_G0015037	Rab23	75	32.086	MGP_PWKPhJ_G0028462	Rasl11b	74	32.086