EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0015476 (Gene tree)
Gene ID: -
Gene Symbol: Hdlbp
Alias: 1110005P14Rik|AA960365|AI118566|D1Ertd101e
Full Name: high density lipoprotein (HDL) binding protein
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 73748 bases
Position: chr1:90259002-90332749
Accession: 99256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0020473	KH_1	PF00013.29	1.7e-188	1	14
MGP_PWKPhJ_P0020473	KH_1	PF00013.29	1.7e-188	2	14
MGP_PWKPhJ_P0020473	KH_1	PF00013.29	1.7e-188	3	14
MGP_PWKPhJ_P0020473	KH_1	PF00013.29	1.7e-188	4	14
MGP_PWKPhJ_P0020473	KH_1	PF00013.29	1.7e-188	5	14
MGP_PWKPhJ_P0020473	KH_1	PF00013.29	1.7e-188	6	14
MGP_PWKPhJ_P0020473	KH_1	PF00013.29	1.7e-188	7	14
MGP_PWKPhJ_P0020473	KH_1	PF00013.29	1.7e-188	8	14
MGP_PWKPhJ_P0020473	KH_1	PF00013.29	1.7e-188	9	14
MGP_PWKPhJ_P0020473	KH_1	PF00013.29	1.7e-188	10	14
MGP_PWKPhJ_P0020473	KH_1	PF00013.29	1.7e-188	11	14
MGP_PWKPhJ_P0020473	KH_1	PF00013.29	1.7e-188	12	14
MGP_PWKPhJ_P0020473	KH_1	PF00013.29	1.7e-188	13	14
MGP_PWKPhJ_P0020473	KH_1	PF00013.29	1.7e-188	14	14
MGP_PWKPhJ_P0020474	KH_1	PF00013.29	1.7e-188	1	14
MGP_PWKPhJ_P0020474	KH_1	PF00013.29	1.7e-188	2	14
MGP_PWKPhJ_P0020474	KH_1	PF00013.29	1.7e-188	3	14
MGP_PWKPhJ_P0020474	KH_1	PF00013.29	1.7e-188	4	14
MGP_PWKPhJ_P0020474	KH_1	PF00013.29	1.7e-188	5	14
MGP_PWKPhJ_P0020474	KH_1	PF00013.29	1.7e-188	6	14
MGP_PWKPhJ_P0020474	KH_1	PF00013.29	1.7e-188	7	14
MGP_PWKPhJ_P0020474	KH_1	PF00013.29	1.7e-188	8	14
MGP_PWKPhJ_P0020474	KH_1	PF00013.29	1.7e-188	9	14
MGP_PWKPhJ_P0020474	KH_1	PF00013.29	1.7e-188	10	14
MGP_PWKPhJ_P0020474	KH_1	PF00013.29	1.7e-188	11	14
MGP_PWKPhJ_P0020474	KH_1	PF00013.29	1.7e-188	12	14
MGP_PWKPhJ_P0020474	KH_1	PF00013.29	1.7e-188	13	14
MGP_PWKPhJ_P0020474	KH_1	PF00013.29	1.7e-188	14	14
MGP_PWKPhJ_P0020475	KH_1	PF00013.29	3.4e-177	1	13
MGP_PWKPhJ_P0020475	KH_1	PF00013.29	3.4e-177	2	13
MGP_PWKPhJ_P0020475	KH_1	PF00013.29	3.4e-177	3	13
MGP_PWKPhJ_P0020475	KH_1	PF00013.29	3.4e-177	4	13
MGP_PWKPhJ_P0020475	KH_1	PF00013.29	3.4e-177	5	13
MGP_PWKPhJ_P0020475	KH_1	PF00013.29	3.4e-177	6	13
MGP_PWKPhJ_P0020475	KH_1	PF00013.29	3.4e-177	7	13
MGP_PWKPhJ_P0020475	KH_1	PF00013.29	3.4e-177	8	13
MGP_PWKPhJ_P0020475	KH_1	PF00013.29	3.4e-177	9	13
MGP_PWKPhJ_P0020475	KH_1	PF00013.29	3.4e-177	10	13
MGP_PWKPhJ_P0020475	KH_1	PF00013.29	3.4e-177	11	13
MGP_PWKPhJ_P0020475	KH_1	PF00013.29	3.4e-177	12	13
MGP_PWKPhJ_P0020475	KH_1	PF00013.29	3.4e-177	13	13
MGP_PWKPhJ_P0020478	KH_1	PF00013.29	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0020478	-	740	-	MGP_PWKPhJ_P0020478	178 (aa)	-	-
MGP_PWKPhJ_T0020479	-	671	-	MGP_PWKPhJ_P0020479	141 (aa)	-	-
MGP_PWKPhJ_T0020483	-	3196	-	-	- (aa)	-	-
MGP_PWKPhJ_T0020482	-	341	-	MGP_PWKPhJ_P0020482	22 (aa)	-	-
MGP_PWKPhJ_T0020481	-	634	-	-	- (aa)	-	-
MGP_PWKPhJ_T0020480	-	850	-	MGP_PWKPhJ_P0020480	129 (aa)	-	-
MGP_PWKPhJ_T0020473	-	6231	XM_006529074	MGP_PWKPhJ_P0020473	1268 (aa)	XP_006529137	Q8VDJ3
MGP_PWKPhJ_T0020476	-	2172	-	-	- (aa)	-	-
MGP_PWKPhJ_T0020477	-	528	-	MGP_PWKPhJ_P0020477	22 (aa)	-	-
MGP_PWKPhJ_T0020474	-	4427	-	MGP_PWKPhJ_P0020474	1268 (aa)	-	-
MGP_PWKPhJ_T0020475	-	3808	-	MGP_PWKPhJ_P0020475	1199 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0015476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0015476's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0015476	Hdlbp	91	46.008	MGP_PWKPhJ_G0034707	4921511C20Rik	100	46.008
MGP_PWKPhJ_G0015476	Hdlbp	94	50.165	MGP_PWKPhJ_G0034706	Gm382	95	50.165