EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0015548 (Gene tree)
Gene ID: -
Gene Symbol: Ddx18
Alias: 2310005B10Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 15268 bases
Position: chr1:117956496-117971763
Accession: 1914192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0020805	ResIII	PF04851.15	6.5e-05	1	1
MGP_PWKPhJ_P0020805	DEAD	PF00270.29	6.9e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0020808	-	451	-	-	- (aa)	-	-
MGP_PWKPhJ_T0020807	-	512	-	MGP_PWKPhJ_P0020807	170 (aa)	-	-
MGP_PWKPhJ_T0020806	-	622	-	-	- (aa)	-	-
MGP_PWKPhJ_T0020805	-	2423	XM_006529794	MGP_PWKPhJ_P0020805	715 (aa)	XP_006529857	Q8K363

Gene Model

Click here to download MGP_PWKPhJ_G0015548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0015548's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0015548	Ddx18	57	30.536	MGP_PWKPhJ_G0016052	D1Pas1	56	31.059
MGP_PWKPhJ_G0015548	Ddx18	58	34.434	MGP_PWKPhJ_G0030210	Ddx47	79	52.308
MGP_PWKPhJ_G0015548	Ddx18	71	32.895	MGP_PWKPhJ_G0028916	Ddx55	79	33.648
MGP_PWKPhJ_G0015548	Ddx18	64	33.898	MGP_PWKPhJ_G0025819	Ddx27	53	33.898
MGP_PWKPhJ_G0015548	Ddx18	54	31.122	MGP_PWKPhJ_G0019621	Ddx41	54	30.357
MGP_PWKPhJ_G0015548	Ddx18	67	33.945	MGP_PWKPhJ_G0024477	Ddx31	72	34.334
MGP_PWKPhJ_G0015548	Ddx18	69	41.463	MGP_PWKPhJ_G0033516	Ddx10	50	41.463
MGP_PWKPhJ_G0015548	Ddx18	60	31.293	MGP_PWKPhJ_G0016418	Ddx50	51	31.293
MGP_PWKPhJ_G0015548	Ddx18	59	32.401	MGP_PWKPhJ_G0033770	Ddx43	55	32.477
MGP_PWKPhJ_G0015548	Ddx18	59	33.333	MGP_PWKPhJ_G0032421	Ddx49	92	34.625