EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0016418 (Gene tree)
Gene ID: -
Gene Symbol: Ddx50
Alias: 4933429B04Rik|8430408E17Rik|GU2|RH-II|RH-II/Gubeta
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 35150 bases
Position: chr10:59302331-59337480
Accession: 2182303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0024479	GUCT	PF08152.12	4.8e-28	1	1
MGP_PWKPhJ_P0024479	ResIII	PF04851.15	5.9e-10	1	1
MGP_PWKPhJ_P0024479	DEAD	PF00270.29	1.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0024479	-	2647	XM_006514345	MGP_PWKPhJ_P0024479	734 (aa)	XP_006514408	Q99MJ9

Gene Model

Click here to download MGP_PWKPhJ_G0016418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0016418's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0016418	Ddx50	50	30.628	MGP_PWKPhJ_G0017628	Eif4a1	88	30.628
MGP_PWKPhJ_G0016418	Ddx50	50	33.962	MGP_PWKPhJ_G0021078	Ddx17	55	33.962
MGP_PWKPhJ_G0016418	Ddx50	56	34.272	MGP_PWKPhJ_G0025819	Ddx27	52	34.129
MGP_PWKPhJ_G0016418	Ddx50	50	31.202	MGP_PWKPhJ_G0018547	Eif4a3	87	31.202
MGP_PWKPhJ_G0016418	Ddx50	54	31.204	MGP_PWKPhJ_G0030210	Ddx47	94	30.175
MGP_PWKPhJ_G0016418	Ddx50	50	31.367	MGP_PWKPhJ_G0021677	Eif4a2	90	30.904
MGP_PWKPhJ_G0016418	Ddx50	51	31.293	MGP_PWKPhJ_G0015548	Ddx18	60	31.293