EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0016505 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp3
Alias: AlphaCP-3
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 199165 bases
Position: chr10:73512314-73711478
Accession: 1890470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0024885	KH_1	PF00013.29	3e-55	1	3
MGP_PWKPhJ_P0024885	KH_1	PF00013.29	3e-55	2	3
MGP_PWKPhJ_P0024885	KH_1	PF00013.29	3e-55	3	3
MGP_PWKPhJ_P0024882	KH_1	PF00013.29	3e-55	1	3
MGP_PWKPhJ_P0024882	KH_1	PF00013.29	3e-55	2	3
MGP_PWKPhJ_P0024882	KH_1	PF00013.29	3e-55	3	3
MGP_PWKPhJ_P0024884	KH_1	PF00013.29	3e-55	1	3
MGP_PWKPhJ_P0024884	KH_1	PF00013.29	3e-55	2	3
MGP_PWKPhJ_P0024884	KH_1	PF00013.29	3e-55	3	3
MGP_PWKPhJ_P0024887	KH_1	PF00013.29	7.9e-19	1	1
MGP_PWKPhJ_P0024885	KH_2	PF07650.17	3.9e-15	1	1
MGP_PWKPhJ_P0024882	KH_2	PF07650.17	4e-15	1	1
MGP_PWKPhJ_P0024884	KH_2	PF07650.17	4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0024891	-	337	-	-	- (aa)	-	-
MGP_PWKPhJ_T0024887	-	605	-	MGP_PWKPhJ_P0024887	160 (aa)	-	-
MGP_PWKPhJ_T0024886	-	1095	-	-	- (aa)	-	-
MGP_PWKPhJ_T0024885	-	2544	-	MGP_PWKPhJ_P0024885	370 (aa)	-	-
MGP_PWKPhJ_T0024884	-	1748	-	MGP_PWKPhJ_P0024884	371 (aa)	-	-
MGP_PWKPhJ_T0024883	-	1736	-	-	- (aa)	-	-
MGP_PWKPhJ_T0024882	-	2013	XM_006513916	MGP_PWKPhJ_P0024882	371 (aa)	XP_006513979	P57722
MGP_PWKPhJ_T0024890	-	716	-	-	- (aa)	-	-
MGP_PWKPhJ_T0024889	-	944	-	MGP_PWKPhJ_P0024889	226 (aa)	-	-
MGP_PWKPhJ_T0024888	-	1442	-	MGP_PWKPhJ_P0024888	394 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0016505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0016505's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0016505	Pcbp3	79	41.667	MGP_PWKPhJ_G0019652	Hnrnpk	77	50.649
MGP_PWKPhJ_G0016505	Pcbp3	85	69.811	MGP_PWKPhJ_G0033933	Pcbp4	93	70.652
MGP_PWKPhJ_G0016505	Pcbp3	89	36.765	MGP_PWKPhJ_G0021667	Igf2bp2	62	33.333
MGP_PWKPhJ_G0016505	Pcbp3	85	31.973	MGP_PWKPhJ_G0024530	Fubp3	77	30.612
MGP_PWKPhJ_G0016505	Pcbp3	66	31.250	MGP_PWKPhJ_G0026865	Fubp1	72	33.019
MGP_PWKPhJ_G0016505	Pcbp3	72	40.351	MGP_PWKPhJ_G0018780	Nova1	59	40.351
MGP_PWKPhJ_G0016505	Pcbp3	99	82.143	MGP_PWKPhJ_G0021414	Pcbp2	99	78.338
MGP_PWKPhJ_G0016505	Pcbp3	86	35.000	MGP_PWKPhJ_G0029531	Igf2bp3	59	33.813
MGP_PWKPhJ_G0016505	Pcbp3	66	33.582	MGP_PWKPhJ_G0018073	Igf2bp1	60	33.333
MGP_PWKPhJ_G0016505	Pcbp3	99	65.873	MGP_PWKPhJ_G0029781	Pcbp1	99	68.033