EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0016603 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 27746 bases
Position: chr10:77114031-77141776
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0025258	RRM_1	PF00076.22	1.4e-36	1	2
MGP_PWKPhJ_P0025258	RRM_1	PF00076.22	1.4e-36	2	2
MGP_PWKPhJ_P0025259	RRM_1	PF00076.22	2.5e-36	1	2
MGP_PWKPhJ_P0025259	RRM_1	PF00076.22	2.5e-36	2	2
MGP_PWKPhJ_P0025260	RRM_1	PF00076.22	2.5e-36	1	2
MGP_PWKPhJ_P0025260	RRM_1	PF00076.22	2.5e-36	2	2
MGP_PWKPhJ_P0025261	RRM_1	PF00076.22	2.5e-36	1	2
MGP_PWKPhJ_P0025261	RRM_1	PF00076.22	2.5e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0025259	-	2093	-	MGP_PWKPhJ_P0025259	408 (aa)	-	-
MGP_PWKPhJ_T0025258	-	598	-	MGP_PWKPhJ_P0025258	171 (aa)	-	-
MGP_PWKPhJ_T0025260	-	1548	-	MGP_PWKPhJ_P0025260	409 (aa)	-	-
MGP_PWKPhJ_T0025261	-	2006	-	MGP_PWKPhJ_P0025261	409 (aa)	-	-
MGP_PWKPhJ_T0025262	-	581	-	-	- (aa)	-	-
MGP_PWKPhJ_T0025263	-	1111	-	-	- (aa)	-	-
MGP_PWKPhJ_T0025264	-	469	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0016603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0016603's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0016603	-	99	34.615	MGP_PWKPhJ_G0019646	Hnrnpa0	79	34.118
MGP_PWKPhJ_G0016603	-	78	30.147	MGP_PWKPhJ_G0023623	Gm21992	90	31.061
MGP_PWKPhJ_G0016603	-	76	31.061	MGP_PWKPhJ_G0023626	Rbm14	89	31.061
MGP_PWKPhJ_G0016603	-	89	33.846	MGP_PWKPhJ_G0019045	Slirp	78	33.846
MGP_PWKPhJ_G0016603	-	64	30.275	MGP_PWKPhJ_G0027434	Elavl4	66	42.373
MGP_PWKPhJ_G0016603	-	86	35.802	MGP_PWKPhJ_G0025865	Rbm38	77	35.484
MGP_PWKPhJ_G0016603	-	74	47.273	MGP_PWKPhJ_G0016597	Cirbp	92	42.105
MGP_PWKPhJ_G0016603	-	89	35.065	MGP_PWKPhJ_G0027964	Tardbp	98	31.818
MGP_PWKPhJ_G0016603	-	94	34.483	MGP_PWKPhJ_G0025673	Rbm39	52	34.483
MGP_PWKPhJ_G0016603	-	99	40.588	MGP_PWKPhJ_G0017360	Hnrnpab	75	37.200
MGP_PWKPhJ_G0016603	-	99	43.307	MGP_PWKPhJ_G0028608	Hnrnpd	91	37.668
MGP_PWKPhJ_G0016603	-	77	39.744	MGP_PWKPhJ_G0015173	Boll	83	44.186
MGP_PWKPhJ_G0016603	-	98	42.857	MGP_PWKPhJ_G0018004	Msi2	99	42.400
MGP_PWKPhJ_G0016603	-	78	46.032	MGP_PWKPhJ_G0034224	Rbm3	90	41.176
MGP_PWKPhJ_G0016603	-	99	39.881	MGP_PWKPhJ_G0028610	Hnrnpdl	76	36.437
MGP_PWKPhJ_G0016603	-	88	39.744	MGP_PWKPhJ_G0034409	Rbmx	94	50.000
MGP_PWKPhJ_G0016603	-	98	44.311	MGP_PWKPhJ_G0028786	Msi1	90	42.308