EuRBPDB

Description

Ensembl ID: MGP_PWKPhJ_G0017050 (Gene tree)
Gene ID: -
Gene Symbol: Patz1
Alias: 8430401L15Rik|AI447519|MAZR|Mazr|POZ-AT hook-zinc finger protein|Patz|Zfp278|Zfp278GN|mazr
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 20619 bases
Position: chr11:97153-117771
Accession: 1891832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0026703	zf-C2H2	PF00096.26	4e-26	1	5
MGP_PWKPhJ_P0026703	zf-C2H2	PF00096.26	4e-26	2	5
MGP_PWKPhJ_P0026703	zf-C2H2	PF00096.26	4e-26	3	5
MGP_PWKPhJ_P0026703	zf-C2H2	PF00096.26	4e-26	4	5
MGP_PWKPhJ_P0026703	zf-C2H2	PF00096.26	4e-26	5	5
MGP_PWKPhJ_P0026705	zf-C2H2	PF00096.26	5.1e-20	1	4
MGP_PWKPhJ_P0026705	zf-C2H2	PF00096.26	5.1e-20	2	4
MGP_PWKPhJ_P0026705	zf-C2H2	PF00096.26	5.1e-20	3	4
MGP_PWKPhJ_P0026705	zf-C2H2	PF00096.26	5.1e-20	4	4
MGP_PWKPhJ_P0026706	zf-C2H2	PF00096.26	1.9e-16	1	3
MGP_PWKPhJ_P0026706	zf-C2H2	PF00096.26	1.9e-16	2	3
MGP_PWKPhJ_P0026706	zf-C2H2	PF00096.26	1.9e-16	3	3
MGP_PWKPhJ_P0026704	zf-C2H2	PF00096.26	2.3e-15	1	3
MGP_PWKPhJ_P0026704	zf-C2H2	PF00096.26	2.3e-15	2	3
MGP_PWKPhJ_P0026704	zf-C2H2	PF00096.26	2.3e-15	3	3
MGP_PWKPhJ_P0026703	zf-met	PF12874.7	3.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0026706	-	3171	-	MGP_PWKPhJ_P0026706	537 (aa)	-	-
MGP_PWKPhJ_T0026707	-	1882	-	MGP_PWKPhJ_P0026707	583 (aa)	-	-
MGP_PWKPhJ_T0026704	-	2927	-	MGP_PWKPhJ_P0026704	537 (aa)	-	-
MGP_PWKPhJ_T0026705	-	3116	-	MGP_PWKPhJ_P0026705	641 (aa)	-	-
MGP_PWKPhJ_T0026702	-	1902	-	MGP_PWKPhJ_P0026702	102 (aa)	-	-
MGP_PWKPhJ_T0026703	-	3702	-	MGP_PWKPhJ_P0026703	687 (aa)	-	-
MGP_PWKPhJ_T0026700	-	1851	-	-	- (aa)	-	-
MGP_PWKPhJ_T0026701	-	839	-	-	- (aa)	-	-
MGP_PWKPhJ_T0026708	-	1249	-	-	- (aa)	-	-
MGP_PWKPhJ_T0026709	-	456	-	-	- (aa)	-	-
MGP_PWKPhJ_T0026710	-	652	-	-	- (aa)	-	-
MGP_PWKPhJ_T0026711	-	495	-	MGP_PWKPhJ_P0026711	70 (aa)	-	-
MGP_PWKPhJ_T0026699	-	804	NR_045109	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0017050	Patz1	97	30.769	MGP_PWKPhJ_G0026023	Mynn	86	30.556
MGP_PWKPhJ_G0017050	Patz1	69	37.059	MGP_PWKPhJ_G0019718	Zfp759	86	37.059