EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0017114 (Gene tree)
Gene ID: -
Gene Symbol: Ddx56
Alias: 2600001H07Rik|D11Ertd619e|NOH61|Noh61
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 56
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 8935 bases
Position: chr11:3161945-3170879
Accession: 1277172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0027017	ResIII	PF04851.15	9.6e-07	1	1
MGP_PWKPhJ_P0027017	DEAD	PF00270.29	7.1e-40	1	1
MGP_PWKPhJ_P0027019	DEAD	PF00270.29	5.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0027019	-	764	-	MGP_PWKPhJ_P0027019	237 (aa)	-	-
MGP_PWKPhJ_T0027018	-	527	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027020	-	621	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027017	-	1956	XM_011243731	MGP_PWKPhJ_P0027017	546 (aa)	XP_011242033	Q9D0R4

Gene Model

Click here to download MGP_PWKPhJ_G0017114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0017114's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0017114	Ddx56	98	33.065	MGP_PWKPhJ_G0025819	Ddx27	53	31.019
MGP_PWKPhJ_G0017114	Ddx56	82	50.000	MGP_PWKPhJ_G0018674	Ddx1	53	50.847
MGP_PWKPhJ_G0017114	Ddx56	97	30.328	MGP_PWKPhJ_G0021677	Eif4a2	63	30.736
MGP_PWKPhJ_G0017114	Ddx56	99	35.887	MGP_PWKPhJ_G0030210	Ddx47	86	38.889
MGP_PWKPhJ_G0017114	Ddx56	66	30.789	MGP_PWKPhJ_G0016052	D1Pas1	52	30.159
MGP_PWKPhJ_G0017114	Ddx56	61	32.051	MGP_PWKPhJ_G0032559	Ddx39	74	34.969
MGP_PWKPhJ_G0017114	Ddx56	94	32.627	MGP_PWKPhJ_G0032421	Ddx49	59	33.175
MGP_PWKPhJ_G0017114	Ddx56	95	31.855	MGP_PWKPhJ_G0032847	Ddx19b	65	32.258
MGP_PWKPhJ_G0017114	Ddx56	80	33.493	MGP_PWKPhJ_G0017941	Ddx52	61	30.846