EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0017160 (Gene tree)
Gene ID: -
Gene Symbol: Rab1a
Alias: ECO:0000313|MGI:MGI:97842},GN Rab1A|Gtbp|Rab-1|Rab1|Rab1 {ECO:0000313|EMBL:EDL07829.1,GN ECO:0000313|Ensembl:ENSMUSP00000127330|Ypt1|mKIAA3012|ras-related YPT1 protein
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 24213 bases
Position: chr11:17074995-17099207
Accession: 97842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0027229	MMR_HSR1	PF01926.23	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0027230	-	702	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027228	-	955	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027229	-	771	-	MGP_PWKPhJ_P0027229	205 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0017160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0017160's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0017160	Rab1a	81	34.337	MGP_PWKPhJ_G0015037	Rab23	70	34.337
MGP_PWKPhJ_G0017160	Rab1a	80	38.415	MGP_PWKPhJ_G0030278	Kras	97	35.676
MGP_PWKPhJ_G0017160	Rab1a	94	36.410	MGP_PWKPhJ_G0033895	Rab6b	94	36.410
MGP_PWKPhJ_G0017160	Rab1a	57	32.203	MGP_PWKPhJ_G0029905	Arl8b	61	32.203
MGP_PWKPhJ_G0017160	Rab1a	58	34.454	MGP_PWKPhJ_G0015652	Arl8a	62	34.454
MGP_PWKPhJ_G0017160	Rab1a	82	45.833	MGP_PWKPhJ_G0026295	Rab25	79	45.833
MGP_PWKPhJ_G0017160	Rab1a	79	31.902	MGP_PWKPhJ_G0030381	Rasl2-9	73	31.902
MGP_PWKPhJ_G0017160	Rab1a	81	50.602	MGP_PWKPhJ_G0031259	Rab30	82	50.602
MGP_PWKPhJ_G0017160	Rab1a	84	35.028	MGP_PWKPhJ_G0031945	Hras	93	35.028
MGP_PWKPhJ_G0017160	Rab1a	95	38.660	MGP_PWKPhJ_G0025872	Rab22a	97	38.660
MGP_PWKPhJ_G0017160	Rab1a	57	31.933	MGP_PWKPhJ_G0018767	Arl4a	59	31.933
MGP_PWKPhJ_G0017160	Rab1a	75	38.608	MGP_PWKPhJ_G0029808	Rab7	100	39.241
MGP_PWKPhJ_G0017160	Rab1a	80	50.909	MGP_PWKPhJ_G0018926	Rab15	78	50.909
MGP_PWKPhJ_G0017160	Rab1a	75	37.580	MGP_PWKPhJ_G0021239	Rabl2	67	37.580
MGP_PWKPhJ_G0017160	Rab1a	99	92.079	MGP_PWKPhJ_G0023645	Rab1b	100	92.079
MGP_PWKPhJ_G0017160	Rab1a	86	43.820	MGP_PWKPhJ_G0034524	Rab39b	84	43.820
MGP_PWKPhJ_G0017160	Rab1a	94	38.384	MGP_PWKPhJ_G0031319	Rab6a	94	38.384
MGP_PWKPhJ_G0017160	Rab1a	57	33.058	MGP_PWKPhJ_G0023703	Arl2	61	33.058
MGP_PWKPhJ_G0017160	Rab1a	62	31.061	MGP_PWKPhJ_G0026192	Arl14	65	31.061
MGP_PWKPhJ_G0017160	Rab1a	97	46.465	MGP_PWKPhJ_G0020303	Rab2b	92	46.465
MGP_PWKPhJ_G0017160	Rab1a	95	32.701	MGP_PWKPhJ_G0016465	Rab36	79	32.701
MGP_PWKPhJ_G0017160	Rab1a	81	45.238	MGP_PWKPhJ_G0018439	Rab37	78	45.238
MGP_PWKPhJ_G0017160	Rab1a	85	52.299	MGP_PWKPhJ_G0033651	Rab11a	100	50.000
MGP_PWKPhJ_G0017160	Rab1a	90	48.108	MGP_PWKPhJ_G0026914	Rab2a	99	45.238
MGP_PWKPhJ_G0017160	Rab1a	82	32.544	MGP_PWKPhJ_G0028189	Rheb	91	32.544
MGP_PWKPhJ_G0017160	Rab1a	77	40.491	MGP_PWKPhJ_G0017846	Rab34	62	40.491
MGP_PWKPhJ_G0017160	Rab1a	94	43.434	MGP_PWKPhJ_G0034357	Rab33a	83	43.434
MGP_PWKPhJ_G0017160	Rab1a	80	36.527	MGP_PWKPhJ_G0033871	Mras	80	36.527
MGP_PWKPhJ_G0017160	Rab1a	94	45.361	MGP_PWKPhJ_G0023083	Rab18	93	45.361
MGP_PWKPhJ_G0017160	Rab1a	57	31.092	MGP_PWKPhJ_G0015423	Arl4c	61	31.092
MGP_PWKPhJ_G0017160	Rab1a	95	43.814	MGP_PWKPhJ_G0022839	Rab5a	90	43.814
MGP_PWKPhJ_G0017160	Rab1a	100	45.581	MGP_PWKPhJ_G0022511	Rab11b	99	45.581
MGP_PWKPhJ_G0017160	Rab1a	99	44.554	MGP_PWKPhJ_G0024594	Rab14	97	47.619
MGP_PWKPhJ_G0017160	Rab1a	83	43.429	MGP_PWKPhJ_G0026098	Rab33b	76	43.429
MGP_PWKPhJ_G0017160	Rab1a	95	43.590	MGP_PWKPhJ_G0018235	Rab5c	89	43.590
MGP_PWKPhJ_G0017160	Rab1a	76	38.994	MGP_PWKPhJ_G0034766	Rab9b	79	38.994
MGP_PWKPhJ_G0017160	Rab1a	82	50.296	MGP_PWKPhJ_G0022939	Rab12	78	46.561
MGP_PWKPhJ_G0017160	Rab1a	90	39.785	MGP_PWKPhJ_G0022930	Rab31	95	39.785
MGP_PWKPhJ_G0017160	Rab1a	68	30.496	MGP_PWKPhJ_G0024156	Arl3	72	30.496
MGP_PWKPhJ_G0017160	Rab1a	76	38.994	MGP_PWKPhJ_G0034923	Rab9	74	38.994