EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0017304 (Gene tree)
Gene ID: -
Gene Symbol: Irgm1
Alias: Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47
Full Name: immunity-related GTPase family M member 1
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 10158 bases
Position: chr11:46235132-46245289
Accession: 107567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0027844	MMR_HSR1	PF01926.23	5.7e-05	1	1
MGP_PWKPhJ_P0027843	MMR_HSR1	PF01926.23	9.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0027842	-	3833	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027843	-	2288	-	MGP_PWKPhJ_P0027843	409 (aa)	-	-
MGP_PWKPhJ_T0027844	-	1214	-	MGP_PWKPhJ_P0027844	288 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0017304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0017304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0017304	Irgm1	78	35.115	MGP_PWKPhJ_G0017308	Gm12185	60	30.115
MGP_PWKPhJ_G0017304	Irgm1	83	39.919	MGP_PWKPhJ_G0017305	-	84	36.634
MGP_PWKPhJ_G0017304	Irgm1	78	35.115	MGP_PWKPhJ_G0017306	-	75	30.500
MGP_PWKPhJ_G0017304	Irgm1	76	35.169	MGP_PWKPhJ_G0030598	Irgc1	79	30.183
MGP_PWKPhJ_G0017304	Irgm1	95	30.732	MGP_PWKPhJ_G0017311	Ifi47	97	30.732
MGP_PWKPhJ_G0017304	Irgm1	90	58.140	MGP_PWKPhJ_G0017435	Irgm2	92	49.057
MGP_PWKPhJ_G0017304	Irgm1	93	31.313	MGP_PWKPhJ_G0023409	-	80	30.548
MGP_PWKPhJ_G0017304	Irgm1	79	41.026	MGP_PWKPhJ_G0017310	Tgtp2	57	41.026