EuRBPDB

Description

Ensembl ID: MGP_PWKPhJ_G0017340 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnph1
Alias: AI642080|E430005G16Rik|Hnrnph|Hnrph|Hnrph1|Hnrph1 {ECO:0000313|EMBL:AAH42187.2,GN ECO:0000313|MGI:MGI:1891925}
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 9929 bases
Position: chr11:47853134-47863062
Accession: 1891925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0027971	zf-RNPHF	PF08080.12	7.8e-10	1	1
MGP_PWKPhJ_P0027971	RRM_1	PF00076.22	3.9e-25	1	2
MGP_PWKPhJ_P0027971	RRM_1	PF00076.22	3.9e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0027984	-	159	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027972	-	1090	-	MGP_PWKPhJ_P0027972	224 (aa)	-	-
MGP_PWKPhJ_T0027973	-	4019	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027971	-	2595	XM_006533875	MGP_PWKPhJ_P0027971	457 (aa)	XP_006533938	O35737
MGP_PWKPhJ_T0027976	-	3976	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027977	-	1116	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027974	-	581	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027975	-	862	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027978	-	860	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027979	-	582	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027983	-	163	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027982	-	582	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027981	-	848	-	-	- (aa)	-	-
MGP_PWKPhJ_T0027980	-	1690	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0017340	Hnrnph1	90	77.311	MGP_PWKPhJ_G0016425	Hnrnph3	77	77.311
MGP_PWKPhJ_G0017340	Hnrnph1	94	93.839	MGP_PWKPhJ_G0034729	Hnrnph2	100	77.686
MGP_PWKPhJ_G0017340	Hnrnph1	86	49.741	MGP_PWKPhJ_G0028539	Grsf1	92	49.741
MGP_PWKPhJ_G0017340	Hnrnph1	91	34.314	MGP_PWKPhJ_G0026936	-	69	34.314
MGP_PWKPhJ_G0017340	Hnrnph1	91	34.314	MGP_PWKPhJ_G0026935	-	69	34.314