EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0017346 (Gene tree)
Gene ID: -
Gene Symbol: Zfp454
Alias: B230342N19
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 15477 bases
Position: chr11:48345739-48361215
Accession: 2679253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0028007	zf-C2H2	PF00096.26	3e-64	1	11
MGP_PWKPhJ_P0028007	zf-C2H2	PF00096.26	3e-64	2	11
MGP_PWKPhJ_P0028007	zf-C2H2	PF00096.26	3e-64	3	11
MGP_PWKPhJ_P0028007	zf-C2H2	PF00096.26	3e-64	4	11
MGP_PWKPhJ_P0028007	zf-C2H2	PF00096.26	3e-64	5	11
MGP_PWKPhJ_P0028007	zf-C2H2	PF00096.26	3e-64	6	11
MGP_PWKPhJ_P0028007	zf-C2H2	PF00096.26	3e-64	7	11
MGP_PWKPhJ_P0028007	zf-C2H2	PF00096.26	3e-64	8	11
MGP_PWKPhJ_P0028007	zf-C2H2	PF00096.26	3e-64	9	11
MGP_PWKPhJ_P0028007	zf-C2H2	PF00096.26	3e-64	10	11
MGP_PWKPhJ_P0028007	zf-C2H2	PF00096.26	3e-64	11	11
MGP_PWKPhJ_P0028005	zf-C2H2	PF00096.26	7.9e-63	1	11
MGP_PWKPhJ_P0028005	zf-C2H2	PF00096.26	7.9e-63	2	11
MGP_PWKPhJ_P0028005	zf-C2H2	PF00096.26	7.9e-63	3	11
MGP_PWKPhJ_P0028005	zf-C2H2	PF00096.26	7.9e-63	4	11
MGP_PWKPhJ_P0028005	zf-C2H2	PF00096.26	7.9e-63	5	11
MGP_PWKPhJ_P0028005	zf-C2H2	PF00096.26	7.9e-63	6	11
MGP_PWKPhJ_P0028005	zf-C2H2	PF00096.26	7.9e-63	7	11
MGP_PWKPhJ_P0028005	zf-C2H2	PF00096.26	7.9e-63	8	11
MGP_PWKPhJ_P0028005	zf-C2H2	PF00096.26	7.9e-63	9	11
MGP_PWKPhJ_P0028005	zf-C2H2	PF00096.26	7.9e-63	10	11
MGP_PWKPhJ_P0028005	zf-C2H2	PF00096.26	7.9e-63	11	11
MGP_PWKPhJ_P0028006	zf-C2H2	PF00096.26	7.9e-63	1	11
MGP_PWKPhJ_P0028006	zf-C2H2	PF00096.26	7.9e-63	2	11
MGP_PWKPhJ_P0028006	zf-C2H2	PF00096.26	7.9e-63	3	11
MGP_PWKPhJ_P0028006	zf-C2H2	PF00096.26	7.9e-63	4	11
MGP_PWKPhJ_P0028006	zf-C2H2	PF00096.26	7.9e-63	5	11
MGP_PWKPhJ_P0028006	zf-C2H2	PF00096.26	7.9e-63	6	11
MGP_PWKPhJ_P0028006	zf-C2H2	PF00096.26	7.9e-63	7	11
MGP_PWKPhJ_P0028006	zf-C2H2	PF00096.26	7.9e-63	8	11
MGP_PWKPhJ_P0028006	zf-C2H2	PF00096.26	7.9e-63	9	11
MGP_PWKPhJ_P0028006	zf-C2H2	PF00096.26	7.9e-63	10	11
MGP_PWKPhJ_P0028006	zf-C2H2	PF00096.26	7.9e-63	11	11
MGP_PWKPhJ_P0028005	zf-met	PF12874.7	0.00061	1	1
MGP_PWKPhJ_P0028006	zf-met	PF12874.7	0.00061	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0028010	-	606	-	-	- (aa)	-	-
MGP_PWKPhJ_T0028007	-	1961	-	MGP_PWKPhJ_P0028007	425 (aa)	-	-
MGP_PWKPhJ_T0028006	-	2094	-	MGP_PWKPhJ_P0028006	536 (aa)	-	-
MGP_PWKPhJ_T0028005	-	2063	XM_006533208	MGP_PWKPhJ_P0028005	536 (aa)	XP_006533271	Q5NCH5
MGP_PWKPhJ_T0028009	-	722	-	MGP_PWKPhJ_P0028009	122 (aa)	-	-
MGP_PWKPhJ_T0028008	-	579	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0017346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0017346's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0017346	Zfp454	86	38.571	MGP_PWKPhJ_G0029639	Prdm5	78	38.571
MGP_PWKPhJ_G0017346	Zfp454	81	39.130	MGP_PWKPhJ_G0018067	Zfp652	64	34.673
MGP_PWKPhJ_G0017346	Zfp454	83	42.424	MGP_PWKPhJ_G0027899	Zbtb17	55	43.322
MGP_PWKPhJ_G0017346	Zfp454	85	42.262	MGP_PWKPhJ_G0028669	Gfi1	100	45.794
MGP_PWKPhJ_G0017346	Zfp454	100	55.556	MGP_PWKPhJ_G0025379	Zfp661	98	55.405
MGP_PWKPhJ_G0017346	Zfp454	86	51.095	MGP_PWKPhJ_G0031767	Zfp768	51	50.523
MGP_PWKPhJ_G0017346	Zfp454	83	49.451	MGP_PWKPhJ_G0030363	Zfp628	60	49.451
MGP_PWKPhJ_G0017346	Zfp454	98	49.583	MGP_PWKPhJ_G0017480	Zfp867	93	47.879
MGP_PWKPhJ_G0017346	Zfp454	84	49.112	MGP_PWKPhJ_G0032485	Zfp709	89	49.112
MGP_PWKPhJ_G0017346	Zfp454	93	46.113	MGP_PWKPhJ_G0032486	Zfp882	99	43.860
MGP_PWKPhJ_G0017346	Zfp454	94	55.208	MGP_PWKPhJ_G0029981	Zfp637	95	55.208
MGP_PWKPhJ_G0017346	Zfp454	99	46.631	MGP_PWKPhJ_G0022233	Zfp945	99	46.761
MGP_PWKPhJ_G0017346	Zfp454	88	42.090	MGP_PWKPhJ_G0022237	Zscan10	79	44.554
MGP_PWKPhJ_G0017346	Zfp454	88	36.888	MGP_PWKPhJ_G0029510	Repin1	92	35.912
MGP_PWKPhJ_G0017346	Zfp454	91	47.041	MGP_PWKPhJ_G0030874	Zfp715	61	57.778
MGP_PWKPhJ_G0017346	Zfp454	98	41.896	MGP_PWKPhJ_G0025805	Zfp334	99	44.103
MGP_PWKPhJ_G0017346	Zfp454	99	54.762	MGP_PWKPhJ_G0030872	-	99	54.762
MGP_PWKPhJ_G0017346	Zfp454	98	47.953	MGP_PWKPhJ_G0019718	Zfp759	100	47.953
MGP_PWKPhJ_G0017346	Zfp454	92	52.000	MGP_PWKPhJ_G0019717	Rslcan18	71	52.000
MGP_PWKPhJ_G0017346	Zfp454	98	51.827	MGP_PWKPhJ_G0033190	Zfp872	92	53.488
MGP_PWKPhJ_G0017346	Zfp454	93	52.078	MGP_PWKPhJ_G0030591	Zfp93	74	52.646
MGP_PWKPhJ_G0017346	Zfp454	98	53.226	MGP_PWKPhJ_G0030592	Zfp61	70	66.667
MGP_PWKPhJ_G0017346	Zfp454	98	49.008	MGP_PWKPhJ_G0030585	Zfp112	72	57.143
MGP_PWKPhJ_G0017346	Zfp454	99	49.041	MGP_PWKPhJ_G0022212	Zfp677	99	50.000
MGP_PWKPhJ_G0017346	Zfp454	100	51.362	MGP_PWKPhJ_G0017355	Zfp354a	100	51.362
MGP_PWKPhJ_G0017346	Zfp454	93	48.441	MGP_PWKPhJ_G0030586	Zfp235	74	57.778
MGP_PWKPhJ_G0017346	Zfp454	100	49.014	MGP_PWKPhJ_G0022214	Zfp51	95	60.714
MGP_PWKPhJ_G0017346	Zfp454	87	58.310	MGP_PWKPhJ_G0030753	Zfp420	98	59.732
MGP_PWKPhJ_G0017346	Zfp454	95	42.697	MGP_PWKPhJ_G0023554	Zfp236	67	45.283
MGP_PWKPhJ_G0017346	Zfp454	98	48.828	MGP_PWKPhJ_G0032857	Zfp1	99	48.828
MGP_PWKPhJ_G0017346	Zfp454	85	56.522	MGP_PWKPhJ_G0030587	-	83	56.742
MGP_PWKPhJ_G0017346	Zfp454	81	47.423	MGP_PWKPhJ_G0028339	Zbtb49	63	50.000
MGP_PWKPhJ_G0017346	Zfp454	88	35.714	MGP_PWKPhJ_G0030622	Zfp574	88	37.500
MGP_PWKPhJ_G0017346	Zfp454	99	54.412	MGP_PWKPhJ_G0021012	Zfp251	95	47.396
MGP_PWKPhJ_G0017346	Zfp454	86	38.583	MGP_PWKPhJ_G0017438	Zfp672	90	42.029
MGP_PWKPhJ_G0017346	Zfp454	85	51.923	MGP_PWKPhJ_G0019323	Zkscan4	50	51.923
MGP_PWKPhJ_G0017346	Zfp454	98	50.523	MGP_PWKPhJ_G0030593	Zfp94	96	50.523
MGP_PWKPhJ_G0017346	Zfp454	98	50.142	MGP_PWKPhJ_G0019737	Zfp748	100	50.142
MGP_PWKPhJ_G0017346	Zfp454	81	35.514	MGP_PWKPhJ_G0030374	Zfp784	71	36.493
MGP_PWKPhJ_G0017346	Zfp454	85	36.486	MGP_PWKPhJ_G0030371	Zfp865	80	36.486
MGP_PWKPhJ_G0017346	Zfp454	84	50.000	MGP_PWKPhJ_G0030372	-	74	31.720
MGP_PWKPhJ_G0017346	Zfp454	98	53.353	MGP_PWKPhJ_G0019743	Zfp493	99	53.353
MGP_PWKPhJ_G0017346	Zfp454	86	46.809	MGP_PWKPhJ_G0025843	Zfp64	73	38.214
MGP_PWKPhJ_G0017346	Zfp454	98	51.136	MGP_PWKPhJ_G0033128	Zfp26	89	51.136
MGP_PWKPhJ_G0017346	Zfp454	85	37.600	MGP_PWKPhJ_G0032702	Zfp319	91	37.989