EuRBPDB

Description

Ensembl ID: MGP_PWKPhJ_G0017360 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpab
Alias: 3010025C11Rik|CBF-A|Cbf-a|Cgbfa|Hnrpab|Hnrpab {ECO:0000313|EMBL:EDL33661.1,GN ECO:0000313|MGI:MGI:1330294}|Hnrpab {ECO:0000313|EMBL:EDL33663.1,GN ECO:0000313|MGI:MGI:1330294}
Full Name: heterogeneous nuclear ribonucleoprotein A/B
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 6851 bases
Position: chr11:49162066-49168916
Accession: 1330294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0028062	CBFNT	PF08143.11	3.2e-19	1	1
MGP_PWKPhJ_P0028064	CBFNT	PF08143.11	3.8e-19	1	1
MGP_PWKPhJ_P0028065	CBFNT	PF08143.11	4.3e-19	1	1
MGP_PWKPhJ_P0028062	RRM_1	PF00076.22	6.5e-34	1	2
MGP_PWKPhJ_P0028062	RRM_1	PF00076.22	6.5e-34	2	2
MGP_PWKPhJ_P0028064	RRM_1	PF00076.22	8.6e-34	1	2
MGP_PWKPhJ_P0028064	RRM_1	PF00076.22	8.6e-34	2	2
MGP_PWKPhJ_P0028065	RRM_1	PF00076.22	1.1e-33	1	2
MGP_PWKPhJ_P0028065	RRM_1	PF00076.22	1.1e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0028063	-	1253	-	MGP_PWKPhJ_P0028063	331 (aa)	-	-
MGP_PWKPhJ_T0028062	-	2370	-	MGP_PWKPhJ_P0028062	285 (aa)	-	Q99020
MGP_PWKPhJ_T0028065	-	1437	-	MGP_PWKPhJ_P0028065	332 (aa)	-	-
MGP_PWKPhJ_T0028064	-	2007	-	MGP_PWKPhJ_P0028064	311 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0017360	Hnrnpab	79	32.906	MGP_PWKPhJ_G0027964	Tardbp	92	34.437
MGP_PWKPhJ_G0017360	Hnrnpab	51	33.846	MGP_PWKPhJ_G0019045	Slirp	73	33.846
MGP_PWKPhJ_G0017360	Hnrnpab	79	40.800	MGP_PWKPhJ_G0028786	Msi1	58	48.052
MGP_PWKPhJ_G0017360	Hnrnpab	75	37.200	MGP_PWKPhJ_G0016603	-	99	40.588
MGP_PWKPhJ_G0017360	Hnrnpab	70	46.018	MGP_PWKPhJ_G0018004	Msi2	100	52.212
MGP_PWKPhJ_G0017360	Hnrnpab	57	35.882	MGP_PWKPhJ_G0019646	Hnrnpa0	59	35.882
MGP_PWKPhJ_G0017360	Hnrnpab	82	58.419	MGP_PWKPhJ_G0028610	Hnrnpdl	89	57.292
MGP_PWKPhJ_G0017360	Hnrnpab	65	31.414	MGP_PWKPhJ_G0033610	Celf6	66	32.500
MGP_PWKPhJ_G0017360	Hnrnpab	82	78.400	MGP_PWKPhJ_G0028608	Hnrnpd	97	70.616