EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0017371 (Gene tree)
Gene ID: -
Gene Symbol: Cdkl3
Alias: AI852479|B230379H01Rik
Full Name: cyclin-dependent kinase-like 3
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 85216 bases
Position: chr11:49581100-49666315
Accession: 2388268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0028103	RIO1	PF01163.22	4.4e-05	1	1
MGP_PWKPhJ_P0028101	RIO1	PF01163.22	0.00027	1	1
MGP_PWKPhJ_P0028108	RIO1	PF01163.22	0.00036	1	1
MGP_PWKPhJ_P0028100	RIO1	PF01163.22	0.00036	1	1
MGP_PWKPhJ_P0028102	RIO1	PF01163.22	0.00036	1	1
MGP_PWKPhJ_P0028096	RIO1	PF01163.22	0.00036	1	1
MGP_PWKPhJ_P0028097	RIO1	PF01163.22	0.00036	1	1
MGP_PWKPhJ_P0028098	RIO1	PF01163.22	0.00037	1	1
MGP_PWKPhJ_P0028107	RIO1	PF01163.22	0.00037	1	1
MGP_PWKPhJ_P0028099	RIO1	PF01163.22	0.00038	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0028098	-	2749	-	MGP_PWKPhJ_P0028098	610 (aa)	-	-
MGP_PWKPhJ_T0028099	-	2765	-	MGP_PWKPhJ_P0028099	595 (aa)	-	-
MGP_PWKPhJ_T0028096	-	2063	XM_006532767	MGP_PWKPhJ_P0028096	585 (aa)	XP_006532830	Q8BLF2
MGP_PWKPhJ_T0028097	-	2387	-	MGP_PWKPhJ_P0028097	585 (aa)	-	-
MGP_PWKPhJ_T0028108	-	2040	-	MGP_PWKPhJ_P0028108	597 (aa)	-	-
MGP_PWKPhJ_T0028109	-	1564	-	MGP_PWKPhJ_P0028109	224 (aa)	-	-
MGP_PWKPhJ_T0028111	-	631	-	MGP_PWKPhJ_P0028111	97 (aa)	-	-
MGP_PWKPhJ_T0028110	-	513	-	MGP_PWKPhJ_P0028110	137 (aa)	-	-
MGP_PWKPhJ_T0028113	-	467	-	MGP_PWKPhJ_P0028113	91 (aa)	-	-
MGP_PWKPhJ_T0028112	-	489	-	MGP_PWKPhJ_P0028112	79 (aa)	-	-
MGP_PWKPhJ_T0028102	-	2008	-	MGP_PWKPhJ_P0028102	581 (aa)	-	-
MGP_PWKPhJ_T0028103	-	665	-	MGP_PWKPhJ_P0028103	192 (aa)	-	-
MGP_PWKPhJ_T0028100	-	2051	-	MGP_PWKPhJ_P0028100	581 (aa)	-	-
MGP_PWKPhJ_T0028101	-	2218	-	MGP_PWKPhJ_P0028101	457 (aa)	-	-
MGP_PWKPhJ_T0028106	-	1560	-	MGP_PWKPhJ_P0028106	451 (aa)	-	-
MGP_PWKPhJ_T0028107	-	2770	-	MGP_PWKPhJ_P0028107	610 (aa)	-	-
MGP_PWKPhJ_T0028104	-	2773	-	MGP_PWKPhJ_P0028104	591 (aa)	-	-
MGP_PWKPhJ_T0028105	-	1332	-	MGP_PWKPhJ_P0028105	375 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0017371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0017371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0017371	Cdkl3	90	35.912	MGP_PWKPhJ_G0028627	Mapk10	84	37.908
MGP_PWKPhJ_G0017371	Cdkl3	88	33.721	MGP_PWKPhJ_G0023742	Mark2	87	33.721
MGP_PWKPhJ_G0017371	Cdkl3	74	32.258	MGP_PWKPhJ_G0022228	-	78	32.530