EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0017999 (Gene tree)
Gene ID: -
Gene Symbol: Srsf1
Alias: 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 6423 bases
Position: chr11:86659592-86666014
Accession: 98283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0030786	RRM_1	PF00076.22	6.3e-34	1	2
MGP_PWKPhJ_P0030786	RRM_1	PF00076.22	6.3e-34	2	2
MGP_PWKPhJ_P0030785	RRM_1	PF00076.22	2.5e-33	1	2
MGP_PWKPhJ_P0030785	RRM_1	PF00076.22	2.5e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0030790	-	401	-	MGP_PWKPhJ_P0030790	57 (aa)	-	-
MGP_PWKPhJ_T0030791	-	759	-	-	- (aa)	-	-
MGP_PWKPhJ_T0030789	-	896	-	MGP_PWKPhJ_P0030789	105 (aa)	-	-
MGP_PWKPhJ_T0030788	-	1011	-	MGP_PWKPhJ_P0030788	253 (aa)	-	-
MGP_PWKPhJ_T0030785	-	5400	-	MGP_PWKPhJ_P0030785	248 (aa)	-	Q6PDM2
MGP_PWKPhJ_T0030787	-	644	-	-	- (aa)	-	-
MGP_PWKPhJ_T0030786	-	2947	-	MGP_PWKPhJ_P0030786	201 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0017999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0017999's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0017999	Srsf1	79	79.762	MGP_PWKPhJ_G0028782	Srsf9	78	70.330
MGP_PWKPhJ_G0017999	Srsf1	82	42.857	MGP_PWKPhJ_G0025725	Srsf6	58	40.670