EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0018004 (Gene tree)
Gene ID: -
Gene Symbol: Msi2
Alias: 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h|Musashi2|msi2h
Full Name: musashi RNA-binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 392195 bases
Position: chr11:86959017-87351211
Accession: 1923876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0030807	RRM_1	PF00076.22	6.3e-34	1	2
MGP_PWKPhJ_P0030807	RRM_1	PF00076.22	6.3e-34	2	2
MGP_PWKPhJ_P0030808	RRM_1	PF00076.22	6.6e-34	1	2
MGP_PWKPhJ_P0030808	RRM_1	PF00076.22	6.6e-34	2	2
MGP_PWKPhJ_P0030811	RRM_1	PF00076.22	3.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0030808	-	1840	-	MGP_PWKPhJ_P0030808	344 (aa)	-	-
MGP_PWKPhJ_T0030809	-	1748	-	-	- (aa)	-	-
MGP_PWKPhJ_T0030811	-	405	-	MGP_PWKPhJ_P0030811	113 (aa)	-	-
MGP_PWKPhJ_T0030807	-	6293	XM_006534432	MGP_PWKPhJ_P0030807	326 (aa)	XP_006534495	Q920Q6
MGP_PWKPhJ_T0030810	-	2492	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0018004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0018004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0018004	Msi2	99	42.400	MGP_PWKPhJ_G0016603	-	98	42.857
MGP_PWKPhJ_G0018004	Msi2	50	33.333	MGP_PWKPhJ_G0015173	Boll	65	32.857
MGP_PWKPhJ_G0018004	Msi2	60	33.824	MGP_PWKPhJ_G0019045	Slirp	70	33.824
MGP_PWKPhJ_G0018004	Msi2	61	42.857	MGP_PWKPhJ_G0034409	Rbmx	89	45.205
MGP_PWKPhJ_G0018004	Msi2	100	90.323	MGP_PWKPhJ_G0028786	Msi1	99	75.665
MGP_PWKPhJ_G0018004	Msi2	61	41.429	MGP_PWKPhJ_G0016597	Cirbp	88	43.243
MGP_PWKPhJ_G0018004	Msi2	100	35.398	MGP_PWKPhJ_G0027964	Tardbp	79	34.351
MGP_PWKPhJ_G0018004	Msi2	99	41.228	MGP_PWKPhJ_G0019646	Hnrnpa0	60	41.989
MGP_PWKPhJ_G0018004	Msi2	100	54.867	MGP_PWKPhJ_G0028610	Hnrnpdl	74	42.623
MGP_PWKPhJ_G0018004	Msi2	100	52.212	MGP_PWKPhJ_G0017360	Hnrnpab	70	46.018
MGP_PWKPhJ_G0018004	Msi2	61	42.857	MGP_PWKPhJ_G0034224	Rbm3	81	43.243
MGP_PWKPhJ_G0018004	Msi2	70	31.250	MGP_PWKPhJ_G0027303	Elavl2	64	31.250
MGP_PWKPhJ_G0018004	Msi2	84	30.208	MGP_PWKPhJ_G0027434	Elavl4	67	30.208
MGP_PWKPhJ_G0018004	Msi2	73	37.349	MGP_PWKPhJ_G0025865	Rbm38	70	38.095
MGP_PWKPhJ_G0018004	Msi2	100	53.982	MGP_PWKPhJ_G0028608	Hnrnpd	87	47.120