EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_PWKPhJ_G0018539 (Gene tree)
Gene ID
-
Gene Symbol
Rbfox3
Alias
D11Bwg0517e|Fox-3|Hrnbp3|NeuN|Neuna60
Full Name
RNA binding protein%2C fox-1 homolog (C. elegans) 3
Gene Type
protein_coding
Species
Mus_musculus_pwkphj
Status
putative
Strand
Minus strand
Length
429695 bases
Position
chr11:118146301-118575995
Accession
106368
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PWKPhJ_P0033174Fox-1_CPF12414.82.3e-4511
MGP_PWKPhJ_P0033178Fox-1_CPF12414.82.3e-4511
MGP_PWKPhJ_P0033179Fox-1_CPF12414.82.3e-4511
MGP_PWKPhJ_P0033176Fox-1_CPF12414.82.7e-4111
MGP_PWKPhJ_P0033177Fox-1_CPF12414.82.8e-4111
MGP_PWKPhJ_P0033173Fox-1_CPF12414.83.2e-4111
MGP_PWKPhJ_P0033180Fox-1_CPF12414.81.7e-2111
MGP_PWKPhJ_P0033181RRM_1PF00076.223.2e-1911
MGP_PWKPhJ_P0033174RRM_1PF00076.221.6e-1811
MGP_PWKPhJ_P0033178RRM_1PF00076.221.6e-1811
MGP_PWKPhJ_P0033179RRM_1PF00076.221.7e-1811
MGP_PWKPhJ_P0033173RRM_1PF00076.222e-1811
MGP_PWKPhJ_P0033177RRM_1PF00076.222.1e-1811
MGP_PWKPhJ_P0033180RRM_1PF00076.222e-1411
MGP_PWKPhJ_P0033176RRM_1PF00076.220.0003711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PWKPhJ_T0033177-3267-MGP_PWKPhJ_P0033177374 (aa)--
MGP_PWKPhJ_T0033176-1553-MGP_PWKPhJ_P0033176329 (aa)--
MGP_PWKPhJ_T0033175-671-MGP_PWKPhJ_P0033175172 (aa)--
MGP_PWKPhJ_T0033174-2809-MGP_PWKPhJ_P0033174313 (aa)--
MGP_PWKPhJ_T0033173-3159XM_006533722MGP_PWKPhJ_P0033173360 (aa)XP_006533785Q8BIF2
MGP_PWKPhJ_T0033182-301--- (aa)--
MGP_PWKPhJ_T0033183-369--- (aa)--
MGP_PWKPhJ_T0033180-710-MGP_PWKPhJ_P0033180145 (aa)--
MGP_PWKPhJ_T0033181-900-MGP_PWKPhJ_P0033181169 (aa)--
MGP_PWKPhJ_T0033179-2228-MGP_PWKPhJ_P0033179327 (aa)--
MGP_PWKPhJ_T0033178-1620-MGP_PWKPhJ_P0033178313 (aa)--
Gene Model
Click here to download MGP_PWKPhJ_G0018539's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0018539's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_PWKPhJ_G0018539Rbfox39961.932MGP_PWKPhJ_G0021020Rbfox29161.408
MGP_PWKPhJ_G0018539Rbfox310071.930MGP_PWKPhJ_G0021490Rbfox19164.850
MGP_PWKPhJ_G0018539Rbfox37231.429MGP_PWKPhJ_G0015173Boll5043.939

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