EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0019045 (Gene tree)
Gene ID: -
Gene Symbol: Slirp
Alias: 1810035L17Rik
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 6927 bases
Position: chr12:79055237-79062163
Accession: 1916394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0034889	RRM_1	PF00076.22	4.2e-14	1	1
MGP_PWKPhJ_P0034888	RRM_1	PF00076.22	9e-14	1	1
MGP_PWKPhJ_P0034890	RRM_1	PF00076.22	8.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0034890	-	335	-	MGP_PWKPhJ_P0034890	102 (aa)	-	-
MGP_PWKPhJ_T0034888	-	802	-	MGP_PWKPhJ_P0034888	99 (aa)	-	Q9D8T7
MGP_PWKPhJ_T0034889	-	339	-	MGP_PWKPhJ_P0034889	112 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0019045's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0019045's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0019045	Slirp	78	33.846	MGP_PWKPhJ_G0016603	-	89	33.846
MGP_PWKPhJ_G0019045	Slirp	70	33.824	MGP_PWKPhJ_G0018004	Msi2	60	33.824
MGP_PWKPhJ_G0019045	Slirp	73	33.846	MGP_PWKPhJ_G0017360	Hnrnpab	51	33.846