EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0019323 (Gene tree)
Gene ID: -
Gene Symbol: Zkscan4
Alias: AI841875|Gm11272|OTTMUSG00000000421
Full Name: zinc finger with KRAB and SCAN domains 4
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 8031 bases
Position: chr13:18018108-18026138
Accession: 3649412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0035730	zf-C2H2	PF00096.26	1.9e-34	1	6
MGP_PWKPhJ_P0035730	zf-C2H2	PF00096.26	1.9e-34	2	6
MGP_PWKPhJ_P0035730	zf-C2H2	PF00096.26	1.9e-34	3	6
MGP_PWKPhJ_P0035730	zf-C2H2	PF00096.26	1.9e-34	4	6
MGP_PWKPhJ_P0035730	zf-C2H2	PF00096.26	1.9e-34	5	6
MGP_PWKPhJ_P0035730	zf-C2H2	PF00096.26	1.9e-34	6	6
MGP_PWKPhJ_P0035730	zf-met	PF12874.7	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0035730	-	2340	-	MGP_PWKPhJ_P0035730	461 (aa)	-	Q5SZT6

Gene Model

Click here to download MGP_PWKPhJ_G0019323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0019323's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0019323	Zkscan4	52	37.156	MGP_PWKPhJ_G0032702	Zfp319	85	36.842
MGP_PWKPhJ_G0019323	Zkscan4	52	43.243	MGP_PWKPhJ_G0022233	Zfp945	78	46.452
MGP_PWKPhJ_G0019323	Zkscan4	55	43.290	MGP_PWKPhJ_G0019717	Rslcan18	74	43.290
MGP_PWKPhJ_G0019323	Zkscan4	52	43.805	MGP_PWKPhJ_G0017438	Zfp672	99	38.636
MGP_PWKPhJ_G0019323	Zkscan4	52	44.156	MGP_PWKPhJ_G0029981	Zfp637	75	44.156
MGP_PWKPhJ_G0019323	Zkscan4	55	41.935	MGP_PWKPhJ_G0019718	Zfp759	88	49.091
MGP_PWKPhJ_G0019323	Zkscan4	61	43.511	MGP_PWKPhJ_G0017668	Bcl6b	52	43.511
MGP_PWKPhJ_G0019323	Zkscan4	54	41.509	MGP_PWKPhJ_G0029639	Prdm5	80	41.060
MGP_PWKPhJ_G0019323	Zkscan4	52	45.833	MGP_PWKPhJ_G0030622	Zfp574	62	41.216
MGP_PWKPhJ_G0019323	Zkscan4	66	43.882	MGP_PWKPhJ_G0030586	Zfp235	73	43.404
MGP_PWKPhJ_G0019323	Zkscan4	52	46.903	MGP_PWKPhJ_G0030587	-	97	44.304
MGP_PWKPhJ_G0019323	Zkscan4	64	53.535	MGP_PWKPhJ_G0030585	Zfp112	56	53.535
MGP_PWKPhJ_G0019323	Zkscan4	56	46.626	MGP_PWKPhJ_G0032485	Zfp709	87	46.626
MGP_PWKPhJ_G0019323	Zkscan4	56	42.763	MGP_PWKPhJ_G0029510	Repin1	95	42.763
MGP_PWKPhJ_G0019323	Zkscan4	52	47.059	MGP_PWKPhJ_G0017355	Zfp354a	57	42.326
MGP_PWKPhJ_G0019323	Zkscan4	50	41.667	MGP_PWKPhJ_G0030363	Zfp628	62	39.918
MGP_PWKPhJ_G0019323	Zkscan4	50	49.655	MGP_PWKPhJ_G0025805	Zfp334	62	49.655
MGP_PWKPhJ_G0019323	Zkscan4	61	44.156	MGP_PWKPhJ_G0030872	-	92	42.553
MGP_PWKPhJ_G0019323	Zkscan4	69	44.068	MGP_PWKPhJ_G0022212	Zfp677	83	42.553
MGP_PWKPhJ_G0019323	Zkscan4	60	51.701	MGP_PWKPhJ_G0030593	Zfp94	72	51.020
MGP_PWKPhJ_G0019323	Zkscan4	50	51.923	MGP_PWKPhJ_G0017346	Zfp454	85	51.923
MGP_PWKPhJ_G0019323	Zkscan4	67	47.143	MGP_PWKPhJ_G0019737	Zfp748	93	47.143
MGP_PWKPhJ_G0019323	Zkscan4	52	50.000	MGP_PWKPhJ_G0033128	Zfp26	79	44.928
MGP_PWKPhJ_G0019323	Zkscan4	53	46.414	MGP_PWKPhJ_G0019743	Zfp493	84	46.414
MGP_PWKPhJ_G0019323	Zkscan4	50	56.250	MGP_PWKPhJ_G0033190	Zfp872	85	56.250
MGP_PWKPhJ_G0019323	Zkscan4	52	44.292	MGP_PWKPhJ_G0032486	Zfp882	85	44.292
MGP_PWKPhJ_G0019323	Zkscan4	57	47.881	MGP_PWKPhJ_G0021012	Zfp251	70	43.830
MGP_PWKPhJ_G0019323	Zkscan4	51	37.295	MGP_PWKPhJ_G0027899	Zbtb17	57	36.975
MGP_PWKPhJ_G0019323	Zkscan4	52	34.914	MGP_PWKPhJ_G0025843	Zfp64	72	34.914
MGP_PWKPhJ_G0019323	Zkscan4	95	37.083	MGP_PWKPhJ_G0022237	Zscan10	98	43.269
MGP_PWKPhJ_G0019323	Zkscan4	54	57.732	MGP_PWKPhJ_G0030591	Zfp93	76	57.732
MGP_PWKPhJ_G0019323	Zkscan4	54	45.000	MGP_PWKPhJ_G0030592	Zfp61	51	45.000
MGP_PWKPhJ_G0019323	Zkscan4	52	50.299	MGP_PWKPhJ_G0032857	Zfp1	67	50.299
MGP_PWKPhJ_G0019323	Zkscan4	52	43.723	MGP_PWKPhJ_G0025379	Zfp661	76	54.348
MGP_PWKPhJ_G0019323	Zkscan4	52	42.667	MGP_PWKPhJ_G0030874	Zfp715	71	46.067
MGP_PWKPhJ_G0019323	Zkscan4	50	47.126	MGP_PWKPhJ_G0023554	Zfp236	68	46.835
MGP_PWKPhJ_G0019323	Zkscan4	50	44.635	MGP_PWKPhJ_G0031767	Zfp768	52	40.574
MGP_PWKPhJ_G0019323	Zkscan4	52	48.305	MGP_PWKPhJ_G0030753	Zfp420	99	48.899