EuRBPDB

Description

Ensembl ID: MGP_PWKPhJ_G0019689 (Gene tree)
Gene ID: -
Gene Symbol: Ercc6l2
Alias: 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278
Full Name: excision repair cross-complementing rodent repair deficiency%2C complementation group 6 like 2
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 86306 bases
Position: chr13:60880611-60966916
Accession: 1923501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0036709	ResIII	PF04851.15	1.9e-11	1	1
MGP_PWKPhJ_P0036712	ResIII	PF04851.15	2.4e-11	1	1
MGP_PWKPhJ_P0036710	ResIII	PF04851.15	2.6e-11	1	1
MGP_PWKPhJ_P0036706	ResIII	PF04851.15	1.3e-10	1	1
MGP_PWKPhJ_P0036713	ResIII	PF04851.15	1.6e-10	1	1
MGP_PWKPhJ_P0036705	ResIII	PF04851.15	1e-09	1	1
MGP_PWKPhJ_P0036709	DEAD	PF00270.29	3.9e-07	1	1
MGP_PWKPhJ_P0036713	DEAD	PF00270.29	4.5e-07	1	1
MGP_PWKPhJ_P0036712	DEAD	PF00270.29	5.7e-07	1	1
MGP_PWKPhJ_P0036710	DEAD	PF00270.29	6.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0036716	-	2579	-	MGP_PWKPhJ_P0036716	592 (aa)	-	-
MGP_PWKPhJ_T0036710	-	2691	-	MGP_PWKPhJ_P0036710	699 (aa)	-	-
MGP_PWKPhJ_T0036711	-	1961	-	MGP_PWKPhJ_P0036711	191 (aa)	-	-
MGP_PWKPhJ_T0036712	-	2528	-	MGP_PWKPhJ_P0036712	684 (aa)	-	-
MGP_PWKPhJ_T0036713	-	1726	-	MGP_PWKPhJ_P0036713	574 (aa)	-	-
MGP_PWKPhJ_T0036707	-	1820	-	-	- (aa)	-	-
MGP_PWKPhJ_T0036706	-	3436	-	MGP_PWKPhJ_P0036706	842 (aa)	-	-
MGP_PWKPhJ_T0036705	-	1592	-	MGP_PWKPhJ_P0036705	467 (aa)	-	Q9JIM3
MGP_PWKPhJ_T0036714	-	759	-	MGP_PWKPhJ_P0036714	152 (aa)	-	-
MGP_PWKPhJ_T0036709	-	1888	-	MGP_PWKPhJ_P0036709	582 (aa)	-	-
MGP_PWKPhJ_T0036708	-	805	-	MGP_PWKPhJ_P0036708	235 (aa)	-	-
MGP_PWKPhJ_T0036715	-	963	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0019689	Ercc6l2	81	41.818	MGP_PWKPhJ_G0034347	Smarca1	67	30.348
MGP_PWKPhJ_G0019689	Ercc6l2	78	32.532	MGP_PWKPhJ_G0026525	Chd1l	50	32.532