EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_PWKPhJ_G0020338 (Gene tree)
Gene ID
-
Gene Symbol
Pabpn1
Alias
PAB2|Pab2|Pabp2|Pabp3|mPABII|poly(A) binding protein II
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Mus_musculus_pwkphj
Status
putative
Strand
Plus strand
Length
6434 bases
Position
chr14:44186704-44193137
Accession
1859158
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PWKPhJ_P0038787RRM_1PF00076.223.9e-1511
MGP_PWKPhJ_P0038792RRM_1PF00076.224.9e-1511
MGP_PWKPhJ_P0038791RRM_1PF00076.221.3e-1411
MGP_PWKPhJ_P0038788RRM_1PF00076.221.4e-1411
MGP_PWKPhJ_P0038789RRM_1PF00076.221.5e-1411
MGP_PWKPhJ_P0038793RRM_1PF00076.228.7e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PWKPhJ_T0038787-680XM_006519272MGP_PWKPhJ_P0038787164 (aa)XP_006519335Q8CCS6
MGP_PWKPhJ_T0038792-700-MGP_PWKPhJ_P0038792178 (aa)--
MGP_PWKPhJ_T0038793-939-MGP_PWKPhJ_P003879342 (aa)--
MGP_PWKPhJ_T0038790-826-MGP_PWKPhJ_P003879073 (aa)--
MGP_PWKPhJ_T0038791-2528-MGP_PWKPhJ_P0038791292 (aa)--
MGP_PWKPhJ_T0038789-1777-MGP_PWKPhJ_P0038789319 (aa)--
MGP_PWKPhJ_T0038788-1030-MGP_PWKPhJ_P0038788302 (aa)--
Gene Model
Click here to download MGP_PWKPhJ_G0020338's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0020338's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_PWKPhJ_G0020338Pabpn1100100.000MGP_PWKPhJ_G0020337Gm2052157100.000
MGP_PWKPhJ_G0020338Pabpn19361.538MGP_PWKPhJ_G0032948Pabpn1l5155.102

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