EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0021414 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp2
Alias: AW412548|Cbp|Hnrnpx|Hnrpx|alphaCP-2
Full Name: poly(rC) binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 33656 bases
Position: chr15:99979651-100013306
Accession: 108202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0042156	KH_1	PF00013.29	1.6e-49	1	3
MGP_PWKPhJ_P0042156	KH_1	PF00013.29	1.6e-49	2	3
MGP_PWKPhJ_P0042156	KH_1	PF00013.29	1.6e-49	3	3
MGP_PWKPhJ_P0042155	KH_1	PF00013.29	2.1e-49	1	3
MGP_PWKPhJ_P0042155	KH_1	PF00013.29	2.1e-49	2	3
MGP_PWKPhJ_P0042155	KH_1	PF00013.29	2.1e-49	3	3
MGP_PWKPhJ_P0042154	KH_1	PF00013.29	2.4e-49	1	3
MGP_PWKPhJ_P0042154	KH_1	PF00013.29	2.4e-49	2	3
MGP_PWKPhJ_P0042154	KH_1	PF00013.29	2.4e-49	3	3
MGP_PWKPhJ_P0042156	KH_2	PF07650.17	2e-14	1	1
MGP_PWKPhJ_P0042155	KH_2	PF07650.17	2.5e-14	1	1
MGP_PWKPhJ_P0042154	KH_2	PF07650.17	3.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0042155	-	2745	-	MGP_PWKPhJ_P0042155	349 (aa)	-	-
MGP_PWKPhJ_T0042154	-	2784	XM_006520582	MGP_PWKPhJ_P0042154	362 (aa)	XP_006520645	Q61990
MGP_PWKPhJ_T0042157	-	444	-	MGP_PWKPhJ_P0042157	147 (aa)	-	-
MGP_PWKPhJ_T0042156	-	2691	-	MGP_PWKPhJ_P0042156	331 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0021414's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0021414's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0021414	Pcbp2	100	81.744	MGP_PWKPhJ_G0029781	Pcbp1	100	81.744
MGP_PWKPhJ_G0021414	Pcbp2	95	35.556	MGP_PWKPhJ_G0021667	Igf2bp2	62	35.556
MGP_PWKPhJ_G0021414	Pcbp2	68	41.096	MGP_PWKPhJ_G0030519	-	50	41.096
MGP_PWKPhJ_G0021414	Pcbp2	84	44.444	MGP_PWKPhJ_G0019652	Hnrnpk	66	44.000
MGP_PWKPhJ_G0021414	Pcbp2	65	54.000	MGP_PWKPhJ_G0031203	-	57	32.576
MGP_PWKPhJ_G0021414	Pcbp2	69	39.726	MGP_PWKPhJ_G0018780	Nova1	53	39.726
MGP_PWKPhJ_G0021414	Pcbp2	99	78.338	MGP_PWKPhJ_G0016505	Pcbp3	99	82.143
MGP_PWKPhJ_G0021414	Pcbp2	97	59.877	MGP_PWKPhJ_G0033933	Pcbp4	98	66.321